- The diverse structural modes of tRNA binding and recognition
2023/06/26 by Anna Biela, Alexander Hammermeister, Igor Kaczmarczyk +6 · 29 citations
Biochemistry, Genetics and Molecular Biology · #Amino acid #Aminoacyl tRNA synthetase #Biochemistry #Biology #Computational biology #Gene #Genetic code #Genetics #Messenger RNA #Protein biosynthesis #RNA #RNA Research and Splicing #RNA and protein synthesis mechanisms #RNA modifications and cancer #Ribosome #T arm #Transfer RNA #Translation (biology)
- Codon Usage Bias: An Endless Tale
2021/08/12 by Andrés Iriarte, Guillermo Lamolle, Héctor Musto · 27 citations
Biochemistry, Genetics and Molecular Biology · #Biology #Codon usage bias #Computational biology #Computer science #Evolutionary biology #Gene #Genetic code #Genetics #Genome #Genomics and Phylogenetic Studies #Messenger RNA #Natural selection #RNA and protein synthesis mechanisms #RNA modifications and cancer #Selection (genetic algorithm) #Stop codon #Synonymous substitution #Translation (biology)
- Frederick Sanger CBE CH OM. 13 August 1918 — 19 November 2013
2015/01/01 by George G. Brownlee · 1 citation
Biochemistry, Genetics and Molecular Biology · #Genetics, Bioinformatics, and Biomedical Research #Genetic code #Sanger sequencing #Nucleic acid #Sequence (biology) #DNA sequencing #Computational biology #DNA #Biology #Genetics
- Expanding and Reprogramming the Genetic Code of Cells and Animals
2014/02/20 by Jason W. Chin · 1 citation
Biochemistry, Genetics and Molecular Biology · #Advanced biosensing and bioanalysis techniques #Amino acid #Aminoacyl tRNA synthetase #Biochemistry #Biology #Computational biology #Gene #Genetic code #Genetics #Genome #Messenger RNA #Protein biosynthesis #RNA #RNA and protein synthesis mechanisms #RNA modifications and cancer #Reprogramming #Ribosome #Transfer RNA #Translation (biology)
- Unearthing the Root of Amino Acid Similarity
2013/06/06 by James D. Stephenson, James Stephenson, Stephen J. Freeland · 13 citations
Biochemistry, Genetics and Molecular Biology · #Alphabet #Amino acid #Artificial intelligence #Biology #Computational biology #Computer science #Genetic code #Genetics #Linguistics #Machine Learning in Bioinformatics #Protein Structure and Dynamics #RNA and protein synthesis mechanisms #Similarity (geometry)
- Self-organization and entropy reduction in a living cell
2012/11/15 by P. C. W. Davies, Paul C.W. Davies, Elisabeth Rieper +2 · 1 citation
Biochemistry, Genetics and Molecular Biology · Mathematics · Physics and Astronomy · #Artificial intelligence #Biological system #Biology #Computer science #Context (archaeology) #DNA #Entropy (arrow of time) #Fractal and DNA sequence analysis #Gene Regulatory Network Analysis #Genetic code #Genetics #Information theory #Living cell #Living systems #Mathematics #Origins and Evolution of Life #Physics #Statistical physics #Statistics #Theoretical computer science #Thermodynamics
- RNA–Amino Acid Binding: A Stereochemical Era for the Genetic Code
2009/09/30 by Michael Yarus, Jeremy Widmann, Rob Knight · 3 citations
Biochemistry, Genetics and Molecular Biology · Chemistry · #Amino acid #Binding site #Biochemistry #Biology #Chemistry #DNA and Nucleic Acid Chemistry #Gene #Genetic code #Genetics #Non-coding RNA #Nucleotide #RNA #RNA and protein synthesis mechanisms #RNA modifications and cancer #Riboswitch #Stereochemistry #Transfer RNA
- Why isoguanine and isocytosine are not the components of the genetic code
2009/06/19 by Andrzej Jaworski, Józef S. Kwiatkowski, Bogdan Lesyng · 2 citations
Biochemistry, Genetics and Molecular Biology · Chemistry · Materials Science · #Biology #Chemistry #Code (set theory) #Computer science #DNA #DNA and Nucleic Acid Chemistry #Enzyme Structure and Function #Genetic code #Genetics #Nucleic acid #Order (exchange) #Programming language #RNA and protein synthesis mechanisms #Stability (learning theory) #Stereochemistry #Tautomer
- The genetic code is nearly optimal for allowing additional information within protein-coding sequences
2007/02/09 by Shalev Itzkovitz, Uri Alon · 4 citations
Biochemistry, Genetics and Molecular Biology · #Bacterial Genetics and Biotechnology #Biology #CRISPR and Genetic Engineering #Coding region #Computational biology #Computer science #DNA #Gene #Genetic code #Genetics #RNA #RNA and protein synthesis mechanisms #RNA splicing #Theoretical computer science
- Addition of p-Azido-l-phenylalanine to the Genetic Code of Escherichia coli
2002/07/11 by Jason W. Chin, Stephen W. Santoro, Andrew B. Martin +3 · 36 citations
Chemistry · #Amino acid #Biochemistry #Chemical Reactions and Mechanisms #Chemistry #Click Chemistry and Applications #Escherichia coli #Fidelity #Gene #Genetic code #Machine learning #Mass Spectrometry Techniques and Applications #Phenylalanine #RNA #Selection (genetic algorithm) #Stereochemistry #Transfer RNA #Yield (engineering)
- Degeneracy and complexity in biological systems
2001/11/06 by Gerald M. Edelman, Joseph A. Gally · 8 citations
Immunology and Microbiology · Neuroscience · #Artificial intelligence #Biology #Computational biology #Computer science #Degeneracy (biology) #Epistemology #Function (biology) #Gene #Genetic code #Genetics #Immune Response and Inflammation #Natural selection #Olfactory and Sensory Function Studies #Philosophy #Population #Property (philosophy) #Selection (genetic algorithm) #Sociology #T-cell and B-cell Immunology #Theoretical computer science
- Genetic Code Variations in Mitochondria: tRNA as a Major Determinant of Genetic Code Plasticity
2001/10/01 by Shin-ichi Yokobori, Shin‐ichi Yokobori, Tsutomu Suzuki +1 · 2 citations
Biochemistry, Genetics and Molecular Biology · #Biology #Codon usage bias #Computational biology #Evolutionary biology #Gene #Genetic code #Genetics #Genome #Genomics and Phylogenetic Studies #Messenger RNA #Mitochondrial DNA #RNA #RNA and protein synthesis mechanisms #RNA modifications and cancer #Sequence (biology) #Transfer RNA #Translation (biology)
- Early Fixation of an Optimal Genetic Code
2000/04/01 by Stephen J. Freeland, Rob Knight, Laura F. Landweber +1 · 3 citations
Biochemistry, Genetics and Molecular Biology · #Amino acid #Artificial intelligence #Biology #Code (set theory) #Computational biology #Computer science #Evolution and Genetic Dynamics #Evolutionary biology #Extant taxon #Fixation (population genetics) #Gene #Genetic code #Genetics #Genomics and Phylogenetic Studies #Metric (unit) #RNA and protein synthesis mechanisms #Selection (genetic algorithm) #Set (abstract data type) #Similarity (geometry)
- Photosynthesis and the Origin of Life
1998/10/01 by Hyman Hartman · 1 citation
Biochemistry, Genetics and Molecular Biology · Chemistry · Physics and Astronomy · #Abiogenesis #Amino acid #Biochemistry #Biology #Carbon fixation #Chemistry #Genetic code #Genetics #Microbial Metabolic Engineering and Bioproduction #Organic chemistry #Origins and Evolution of Life #Photosynthesis #Photosynthetic Processes and Mechanisms #Polynucleotide phosphorylase #Purine #Sulfur
- Rhyme or reason: RNA-arginine interactions and the genetic code
1998/09/01 by Rob Knight, Robin D. Knight, Laura F. Landweber · 6 citations
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Advanced biosensing and bioanalysis techniques #Amino acid #Aptamer #Arginine #Bacteriophages and microbial interactions #Biochemistry #Biology #Code (set theory) #Computational biology #Computer science #Evolutionary biology #Gene #Genetic code #Genetics #Linguistics #Nucleic acid #Programming language #RNA #RNA and protein synthesis mechanisms #Rhyme
- Intrastrand parity rules of DNA base composition and usage biases of synonymous codons
1995/03/01 by Noboru Sueoka · 33 citations
Biochemistry, Genetics and Molecular Biology · #Advanced biosensing and bioanalysis techniques #Amino acid #Base pair #Biology #Codon usage bias #DNA #DNA and Nucleic Acid Chemistry #GC-content #Gene #Genetic code #Genetics #Mutation #Nucleotide #Parity (physics) #Physics #RNA #RNA and protein synthesis mechanisms #Silent mutation #Stop codon #Synonymous substitution #Transcription (linguistics) #Transfer RNA
- Evolution of the mitochondrial genetic code II. Reassignment of codon AUA from isoleucine to methionine
1989/11/01 by Syozo Osawa, Takeshi Ohama, Thomas H. Jukes +2 · 8 citations
Biochemistry, Genetics and Molecular Biology · #Amino acid #Biology #Codon usage bias #Gene #Genetic code #Genetics #Genome #Isoleucine #Leucine #Messenger RNA #Metabolism and Genetic Disorders #Methionine #Mitochondrial Function and Pathology #RNA #RNA and protein synthesis mechanisms #Start codon #Stop codon #Transfer RNA #Translation (biology)
- Nucleotide sequence of bacteriophage λ DNA
1982/12/01 by Frederick Sanger, F. Sanger, Alan Coulson +6 · 4 citations
Biochemistry, Genetics and Molecular Biology · #Bacterial Genetics and Biotechnology #Base pair #Biology #Coding region #Computational biology #Consensus sequence #DNA #DNA sequencing #Gene #Genetic code #Genetics #Genomics and Phylogenetic Studies #Nucleic acid sequence #Open reading frame #Peptide sequence #RNA and protein synthesis mechanisms #Reading frame #Sequence (biology) #Stop codon
- Nucleotide Sequence from the Coat Protein Cistron of R17 Bacteriophage RNA
1969/09/01 by J. M. ADAMS, Jerry M. Adams, Peter Jeppesen +5 · 3 citations
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Bacteriophage #Bacteriophages and microbial interactions #Base pair #Biology #Cistron #Coat protein #Escherichia coli #Gene #Genetic code #Genetics #Nucleotide #RNA #RNA and protein synthesis mechanisms #RNA modifications and cancer #Sequence (biology) #Virology