- IQ-TREE 3: phylogenomic inference software using complex evolutionary models
2026/05/01 by Thomas K. F. Wong, Thomas K F Wong, Nhan Ly-Trong +17 · 3 voices · 58 citations
Biochemistry, Genetics and Molecular Biology · Computer Science · Mathematics · #Artificial intelligence #Biology #Clade #Computer science #Evolution and Genetic Dynamics #Evolutionary Algorithms and Applications #Genetics #Inference #Machine learning #Mathematics #Phylogenetics #Phylogenomics #Programming language #Software #Software development #Software evolution #Tree (set theory)
- Modular enantioselective photocatalysts from privileged pybox scaffolds
2026/04/09 by Riley M. Kelch, Lea Hämmerling, Eli Zysman‐Colman +1 · 2 voices
Chemistry · #Biochemistry #Business #Catalysis #Catalytic C–H Functionalization Methods #Chemistry #Computer science #Enantioselective synthesis #Materials science #Modular design #Nanotechnology #Oxidative Organic Chemistry Reactions #Programming language #Radical Photochemical Reactions
- Optimized noise-resilient surface code teleportation interfaces
2025/03/06 by Mohamed A. Shalby, Shalby, Mohamed A., Renyu Wang +6 · 1 voice · 9 citations
Biochemistry, Genetics and Molecular Biology · Computer Science · #Artificial intelligence #Cellular Automata and Applications #Code (set theory) #Computer science #DNA and Biological Computing #Noise (video) #Physics #Programming language #Quantum #Quantum Computing Algorithms and Architecture #Quantum channel #Quantum entanglement #Teleportation
- Rewiring an olfactory circuit by altering the combinatorial code of cell-surface proteins
2025/03/02 by Cheng Lyu, Zhuoran Li, Chuanyun Xu +2 · 1 voice · 1 citation
Materials Science · Mathematics · Neuroscience · #Biology #Cell #Cell biology #Code (set theory) #Computer science #Genetics #Geometry #Mathematics #Neurobiology and Insect Physiology Research #Neuroscience #Olfactory and Sensory Function Studies #Photochromic and Fluorescence Chemistry #Programming language #Surface (topology)
- Enhancing hepatopathy clinical trial efficiency: a secure, large language model-powered pre-screening pipeline
2025/02/25 by Xiongbin Gui, Gui, Xiongbin, Hanlin Lv +9 · 1 citation
Computer Science · Medicine · #Artificial Intelligence in Healthcare and Education #Computer science #Data science #Machine Learning in Healthcare #Pipeline (software) #Programming language #Topic Modeling
- Competitive Programming with Large Reasoning Models
2025/02/03 by OpenAI, :, Ahmed El-Kishky +50 · 13 voices · 71 citations
Computer Science · Decision Sciences · Economics, Econometrics and Finance · #Computer science #Economic theories and models #Multi-Criteria Decision Making #Programming language #cs.AI #cs.CL #cs.LG
- Janus-Pro: Unified Multimodal Understanding and Generation with Data and Model Scaling
2025/01/29 by Xiaokang Chen, Chen, Xiaokang, Zhiyu Wu +13 · 1 voice · 387 citations
Computer Science · Mathematics · #Computer science #Data science #Geometry #Janus #Mathematics #Programming language #Scaling #Semantic Web and Ontologies #cs.AI #cs.CL #cs.CV
- Additional material Effort paper
2025/01/08 by Marco Bonici, Guido D'Amico, Guido D’Amico +8 · 2 voices · 3 citations
Engineering · Mathematics · Physics and Astronomy · #Algorithm #Artificial intelligence #Bayesian probability #Boss #Code (set theory) #Computational science #Computer engineering #Computer science #Cosmology and Gravitation Theories #Data mining #Differentiable function #Engineering #Field (mathematics) #Galaxies: Formation, Evolution, Phenomena #Mathematics #Monte Carlo method #Physics #Preprocessor #Programming language #Reliability (semiconductor) #Scale (ratio) #Scientific Research and Discoveries #Set (abstract data type) #Statistics #Universe #astro-ph.CO #astro-ph.IM
- Enhancing Code LLMs with Reinforcement Learning in Code Generation: A Survey
2024/12/29 by Junqiao Wang, Zhang Zeng, Wang, Junqiao +28 · 57 citations
Computer Science · Psychology · #Artificial intelligence #Code (set theory) #Computation and Language (cs.CL) #Computer science #FOS: Computer and information sciences #Natural Language Processing Techniques #Programming language #Psychology #Reinforcement #Reinforcement learning #Social psychology #Software Engineering (cs.SE)
- Logical Operators and Fold-Transversal Gates of Bivariate Bicycle Codes
2024/12/23 by Jens Niklas Eberhardt, Vincent Steffan · 15 citations
Computer Science · Engineering · Mathematics · #Algorithm #Arithmetic #Coding theory and cryptography #Computer science #Error Correcting Code Techniques #Fold (higher-order function) #Mathematics #Programming language #Theoretical computer science #Transversal (combinatorics) #graph theory and CDMA systems
- py.Aroma: An Intuitive Graphical User Interface for Diverse Aromaticity Analyses
2024/12/23 by Zhe Wang · 1 voice · 8 citations
Chemistry · Mathematics · #Aroma #Aromaticity #Axial and Atropisomeric Chirality Synthesis #Chemistry #Computer science #Food science #Graph theory and applications #Graphical user interface #Human–computer interaction #Interface (matter) #Molecule #Organic chemistry #Parallel computing #Programming language #Synthesis and Properties of Aromatic Compounds
- Experimental demonstration of logical magic state distillation
2024/12/19 by Pedro Sales Rodriguez, J. Michael Robinson, Rodriguez, Pedro Sales +152 · 5 voices · 91 citations
Chemistry · Computer Science · #Advanced Text Analysis Techniques #Astronomy #Chemistry #Chromatography #Computer science #Distillation #MAGIC (telescope) #Neural Networks and Applications #Physics #Programming language #Scientific Research and Philosophical Inquiry #State (computer science)
- Scaling and logic in the colour code on a superconducting quantum processor
2024/12/18 by Nathan Lacroix, Lacroix, Nathan, Alexandre Bourassa +473 · 8 voices · 55 citations
Computer Science · Mathematics · #Code (set theory) #Computer science #Mathematics #Neural Networks and Reservoir Computing #Physics #Programming language #Quantum #Quantum Computing Algorithms and Architecture #Quantum mechanics #Quantum-Dot Cellular Automata #Scaling #Superconductivity
- Flow Matching Guide and Code
2024/12/09 by Yaron Lipman, Marton Havasi, Lipman, Yaron +18 · 10 voices · 115 citations
Computer Science · Decision Sciences · Mathematics · #Code (set theory) #Computer science #Flow (mathematics) #Matching (statistics) #Mathematics #Mechanics #Physics #Programming language #Simulation Techniques and Applications #Software System Performance and Reliability #Statistics
- Marco-o1: Towards Open Reasoning Models for Open-Ended Solutions
2024/11/21 by Yu Zhao, Huifeng Yin, Zhao, Yu +15 · 7 voices · 62 citations
Business, Management and Accounting · Computer Science · Engineering · #Business Process Modeling and Analysis #Computer science #Engineering #Epistemology #Knowledge management #Management science #Multi-Agent Systems and Negotiation #Open research #Open source #Philosophy #Programming language #Semantic Web and Ontologies #Software #World Wide Web #cs.CL
- The Dawn of GUI Agent: A Preliminary Case Study with Claude 3.5 Computer Use
2024/11/15 by Siyuan Hu, Mingyu Ouyang, Hu, Siyuan +5 · 6 voices · 30 citations
Mathematics · #Computer graphics (images) #Computer science #Human–computer interaction #Modeling, Simulation, and Optimization #Programming language
- AutoML-Agent: A Multi-Agent LLM Framework for Full-Pipeline AutoML
2024/10/03 by Patara Trirat, Wonyong Jeong, Trirat, Patara +3 · 1 voice · 37 citations
Computer Science · #Computer science #Machine Learning and Data Classification #Pipeline (software) #Programming language #cs.AI #cs.CL #cs.LG #cs.MA
- Predicting Expert Evaluations in Software Code Reviews
2024/09/23 by Yegor Denisov-Blanch, Denisov-Blanch, Yegor, Igor Ciobanu +6 · 6 voices · 2 citations
Computer Science · #Code (set theory) #Computer science #Programming language #Software #Software Engineering Research #Software Engineering Techniques and Practices #Software Reliability and Analysis Research #Software engineering #cs.SE
- Large Language Model-Based Agents for Software Engineering: A Survey
2024/09/04 by Junwei Liu, Liu, Junwei, Kaixin Wang +11 · 88 citations
Computer Science · #Computer science #Multi-Agent Systems and Negotiation #Programming language #Service-Oriented Architecture and Web Services #Software engineering
- Quantum error correction below the surface code threshold
2024/08/24 by Rajeev Acharya, Google Quantum AI and Collaborators, Laleh Aghababaie-Beni +257 · 20 voices · 490 citations
Computer Science · Mathematics · #Advanced Data Storage Technologies #Code (set theory) #Computer science #Geometry #Mathematics #Programming language #Quantum Computing Algorithms and Architecture #Quantum Information and Cryptography #Set (abstract data type) #Surface (topology)
- The Genomic Code: The genome instantiates a generative model of the organism
2024/07/22 by Kevin J. Mitchell, Mitchell, Kevin J., Nick Cheney +1 · 11 voices · 6 citations
Biochemistry, Genetics and Molecular Biology · #Artificial intelligence #Biology #Code (set theory) #Computational biology #Computer science #Gene #Generative grammar #Genetics #Genetics, Bioinformatics, and Biomedical Research #Genome #Model organism #Organism #Programming language #Set (abstract data type)
- Vulnerability Detection via Multiple-Graph-Based Code Representation
2024/07/12 by Fangcheng Qiu, Zhongxin Liu, Xing Hu +3 · 5 citations
Computer Science · #Advanced Malware Detection Techniques #Code (set theory) #Computer science #Computer security #Graph #Programming language #Software Reliability and Analysis Research #Theoretical computer science #Vulnerability (computing) #Web Application Security Vulnerabilities
- GPT-4 is judged more human than humans in displaced and inverted Turing tests
2024/07/11 by Ishika Rathi, Rathi, Ishika, Sydney Taylor +5 · 7 voices · 4 citations
Engineering · #Computer science #Computer security #Ferroelectric and Negative Capacitance Devices #Programming language #Turing
- An Empirical Comparison of Vocabulary Expansion and Initialization Approaches for Language Models
2024/07/08 by Nandini Mundra, Mundra, Nandini, Aditya Nanda Kishore +9 · 11 citations
Computer Science · Mathematics · #Artificial intelligence #Computation and Language (cs.CL) #Computer science #Econometrics #Economics #Empirical research #FOS: Computer and information sciences #Initialization #Linguistics #Machine Learning (cs.LG) #Mathematics #Natural Language Processing Techniques #Natural language processing #Philosophy #Programming language #Speech and dialogue systems #Statistics #Topic Modeling #Vocabulary
- Seeing is Believing: Vision-driven Non-crash Functional Bug Detection for Mobile Apps
2024/07/03 by Zhe Liu, Liu, Zhe, Cheng Li +14 · 5 citations
Computer Science · Engineering · #Artificial intelligence #Computer science #FOS: Computer and information sciences #Human–computer interaction #Machine learning #Model-based testing #Multimodal Machine Learning Applications #Natural language processing #Programming language #Robotics and Automated Systems #Software Engineering (cs.SE) #Test case #Web Data Mining and Analysis
- A Comparative Study of DSL Code Generation: Fine-Tuning vs. Optimized Retrieval Augmentation
2024/07/03 by Nastaran Bassamzadeh, Bassamzadeh, Nastaran, Chhaya Methani +1 · 4 citations
Computer Science · #Code (set theory) #Computer network #Computer science #Digital Rights Management and Security #Digital subscriber line #Natural Language Processing Techniques #Programming language #Set (abstract data type)
- On the Evaluation of Large Language Models in Unit Test Generation
2024/06/26 by Lin Yang, Chen Yang, Yang, Lin +20 · 4 voices · 30 citations
Computer Science · Mathematics · Psychology · Social Sciences · #Computational and Text Analysis Methods #Computer science #Empirical research #Geology #Mathematics #Mathematics education #Natural Language Processing Techniques #Programming language #Psychology #Statistics #Test (biology) #Topic Modeling #Unit (ring theory) #Unit testing
- Can Long-Context Language Models Subsume Retrieval, RAG, SQL, and More?
2024/06/19 by Jinhyuk Lee, Lee, Jinhyuk, Anthony Chen +36 · 1 voice · 13 citations
Computer Science · #Archaeology #Artificial Intelligence (cs.AI) #Artificial intelligence #Computation and Language (cs.CL) #Computer science #Context (archaeology) #Database #FOS: Computer and information sciences #History #Information Retrieval (cs.IR) #Linguistics #Natural Language Processing Techniques #Natural language processing #Philosophy #Programming language #SQL #Topic Modeling #cs.AI #cs.CL #cs.IR
- CoSQA+: Pioneering the Multi-Choice Code Search Benchmark with Test-Driven Agents
2024/06/17 by Jing Gong, Gong, Jing, Yanghui Wu +9 · 4 citations
Computer Science · Mathematics · #Code (set theory) #Computer science #Matching (statistics) #Mathematics #Natural Language Processing Techniques #Programming language #Statistics #Topic Modeling #Web Data Mining and Analysis
- AutoSurvey: Large Language Models Can Automatically Write Surveys
2024/06/10 by Yidong Wang, Wang, Yidong, Qi Guo +23 · 58 citations
Computer Science · Decision Sciences · Social Sciences · #Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #Computational and Text Analysis Methods #Computer science #Data Quality and Management #FOS: Computer and information sciences #Information Retrieval (cs.IR) #Programming language #Topic Modeling
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