Julian König
- iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
2010/07/01 by Julian König, Kathi Zarnack, Gregor Rot +8 · 18 citations
Biochemistry, Genetics and Molecular Biology · #Alternative splicing #Biology #Cell biology #Exon #Exonic splicing enhancer #Gene #Genetics #Heterogeneous nuclear ribonucleoprotein #Heterogeneous ribonucleoprotein particle #Immunoprecipitation #Intron #Precursor mRNA #RNA #RNA Research and Splicing #RNA and protein synthesis mechanisms #RNA modifications and cancer #RNA splicing #RNA-binding protein #Ribonucleoprotein #Small nuclear ribonucleoprotein
- Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions
2012/08/03 by Yoichiro Sugimoto, Julian König, Shobbir Hussain +4 · 7 citations
Biochemistry, Genetics and Molecular Biology · Chemistry · #RNA Research and Splicing #RNA modifications and cancer #RNA and protein synthesis mechanisms #RNA #Immunoprecipitation #Complementary DNA #Nucleotide #RNA-binding protein #Biology #Computational biology #Molecular biology #Protein–protein interaction #Uridine #Genetics #Chemistry #Gene
- Characterizing the RNA targets and position-dependent splicing regulation by TDP-43
2011/02/27 by James Tollervey, Tomaž Curk, Boris Rogelj +13 · 6 citations
Medicine · Biochemistry, Genetics and Molecular Biology · #Amyotrophic Lateral Sclerosis Research #RNA Research and Splicing #Neurogenetic and Muscular Disorders Research #RNA splicing #RNA-binding protein #Frontotemporal lobar degeneration #Alternative splicing #Exon #Biology #Gene isoform #RNA #Messenger RNA #Cell biology #Molecular biology #Genetics #Gene #Frontotemporal dementia #Medicine
- Direct Competition between hnRNP C and U2AF65 Protects the Transcriptome from the Exonization of Alu Elements
2013/01/01 by Kathi Zarnack, Julian König, Mojca Tajnik +7 · 4 citations
Biochemistry, Genetics and Molecular Biology · #RNA Research and Splicing #RNA and protein synthesis mechanisms #RNA modifications and cancer #Biology #Alu element #Minigene #Transcriptome #Genetics #RNA splicing #Transposable element #Exon #Human genome #Genome #Alternative splicing #Gene #RNA #Gene expression
- Protein–RNA interactions: new genomic technologies and perspectives
2012/01/18 by Julian König, Kathi Zarnack, Nicholas M. Luscombe +1 · 3 citations
Biochemistry, Genetics and Molecular Biology · #Biology #Computational biology #Gene #Gene expression #Genetics #Messenger RNA #Non-coding RNA #Post-transcriptional regulation #RNA #RNA Research and Splicing #RNA and protein synthesis mechanisms #RNA modifications and cancer #RNA-binding protein #Ribosome #Transcription (linguistics) #Translation (biology) #microRNA
- K6-linked ubiquitylation marks formaldehyde-induced RNA-protein crosslinks for resolution
2023/11/09 by Aldwin Suryo Rahmanto, C Blum, Claudia Scalera +21 · 1 voice · 4 citations
Biochemistry, Genetics and Molecular Biology · #RNA Research and Splicing #RNA modifications and cancer #RNA regulation and disease
- Analysis of Protein–RNA Interactions with Single‐Nucleotide Resolution Using iCLIP and Next‐Generation Sequencing
2011/12/14 by Julian König, Nicholas J. McGlincy, Jernej Ule · 1 citation
Biochemistry, Genetics and Molecular Biology · #RNA and protein synthesis mechanisms #RNA Research and Splicing #RNA modifications and cancer #Computational biology #RNA-binding protein #RNA #Nucleotide #Biology #Gene #Binding site #Genetics
- Dissecting the RNA-binding capacity of the multi-RRM protein Rrm4 essential for endosomal mRNA transport
2026/03/19 by Nina Kim Stoffel, Srimeenakshi Sankaranarayanan, Kira Müntjes +4 · 2 voices
Biochemistry, Genetics and Molecular Biology · #Binding site #Endosome #Function (biology) #Messenger RNA #Nuclear Structure and Function #Plasma protein binding #RNA #RNA Research and Splicing #RNA modifications and cancer #RNA-binding protein #Regulon #Transport protein