- An Aspergillus lncRNA atlas reveals a novel modulator of aflatoxin biosynthesis
2026/05/30 by M. Laura Fabre, Jin Woo Bok, Benjamin J. Haefner +2 · 2 voices
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Aspergillus flavus #Aspergillus fumigatus #Functional genomics #Fungal and yeast genetics research #Gene #Genome #Mycotoxins in Agriculture and Food #Plant and Fungal Interactions Research #Secondary metabolism #Transcriptome #Transposable element
- Transposon Ecology and the Octopus Genome
2026/03/01 by Stefan Linquist, Tyler A. Elliott, Stefan C. Kremer +3 · 1 voice · 2 citations
Agricultural and Biological Sciences · #Cephalopods and Marine Biology #Chromosomal and Genetic Variations #Echinoderm biology and ecology #Gene #Genome #Genome evolution #Germline #Transposable element #octopus (software)
- Global genetic rewiring during compensatory evolution in the yeast polarity network
2026/02/16 by Enzo Kingma, Marieke M. Glazenburg, Karel Olavarría +1 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Evolution and Genetic Dynamics #Function (biology) #Fungal and yeast genetics research #Gene #Gene regulatory network #Genetic Fitness #Mutagenesis #Polarity (international relations) #Saccharomyces cerevisiae #Transposable element
- A reference-free pipeline for detecting shared transposable elements from pan-genomes to retrace their dynamics in a species
2026/02/07 by Somia Saidi, Mathieu Blaison, María del Pilar Rodríguez-Ordóñez +2 · 2 voices · 1 citation
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Brachypodium #Brachypodium distachyon #Chromosomal and Genetic Variations #Genome #Genome Rearrangement Algorithms #Genomics #Genomics and Phylogenetic Studies #Pipeline (software) #Transposable element
- Prevalence and Evolutionary Implications of Genome Rearrangements in Bacteria
2026/01/14 by Carolina A. Martínez-Gutiérrez, Yuqi Huang, Louis‐Marie Bobay · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · #Bacterial Genetics and Biotechnology #Comparative genomics #Gene #Genome #Genome Rearrangement Algorithms #Genome evolution #Genomic island #Genomics and Phylogenetic Studies #Mobile genetic elements #Synteny #Transposable element
- TDP-43 dysfunction leads to the accumulation of cryptic transposable element-derived exons, crypTEs, in iPSC derived neurons and ALS/FTD patient tissues
2026/01/09 by Isobel Bolger, Regina Shaw, Oliver H. Tam +7 · 2 voices
Biochemistry, Genetics and Molecular Biology · Medicine · Neuroscience · #Alternative splicing #Amyotrophic Lateral Sclerosis Research #Exon #Gene #Gene expression #Genetic Neurodegenerative Diseases #Intron #RNA #RNA Research and Splicing #RNA splicing #Regulation of gene expression #Transposable element
- Blinded by the lights? Re-examining the adaptive role of transposable elements in plants with population genomics
2025/12/20 by Anne C. Roulin · 1 voice · 1 citation
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Adaptation (eye) #Chromosomal and Genetic Variations #Genetic Fitness #Genome #Genomics #Genomics and Phylogenetic Studies #Human evolutionary genetics #Local adaptation #Natural selection #Plant Molecular Biology Research #Population #Population genomics #Transposable element
- Extensive horizontal transfer of transposable elements shapes fungal mobilomes
2025/12/05 by Josje Romeijn, Iñigo Bañales, Michael Seidl +1 · 1 voice · 4 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Chromosomal and Genetic Variations #DNA #DNA Transposable Elements #Genome #Genome evolution #Genome size #Horizontal gene transfer #Plant Pathogens and Fungal Diseases #Protist diversity and phylogeny #Transposable element
- Tangerine: a new family of Starships from lichen-forming fungi
2025/11/27 by Gulnara Tagirdzhanova, Noah E. Brown, Angus Bucknell +6 · 1 voice · 1 citation
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Fungus #Gene #Genome #Genomics and Phylogenetic Studies #Horizontal gene transfer #Lichen #Lichen and fungal ecology #Mucorales #Protist diversity and phylogeny #Transposable element
- A comparative analysis of transposable element diversity and evolution across 75 bee genomes
2025/11/05 by Hannah L. Cook, John S. Sproul, Elizabeth A. Murray +1 · 1 voice · 1 citation
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Chromosomal and Genetic Variations #Comparative genomics #Context (archaeology) #Genetic diversity and population structure #Genome #Genome evolution #Genome size #Genomics and Phylogenetic Studies #Lineage (genetic) #Phylogenetics #Retrotransposon #Transposable element
- A mosaic of modular variation at a single gene underpins convergent plumage coloration
2025/10/16 by Dave Lutgen, Valentina Peona, Madeline A. Chase +44 · 1 voice · 4 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Chromosomal and Genetic Variations #Convergent evolution #Foraging #Genetic architecture #Genetic diversity and population structure #Genetic variation #Genomics and Phylogenetic Studies #Introgression #Plumage #Transposable element #Variation (astronomy)
- A human-specific regulatory mechanism revealed in a pre-implantation model
2025/10/01 by Raquel Fueyo, Sicong Wang, Olivia J Crocker +3 · 1 voice · 4 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #CRISPR and Genetic Engineering #Chromosomal and Genetic Variations #Endogenous retrovirus #Epiblast #Gene #Genome #Genomics and Chromatin Dynamics #Human genome #Promoter #Regulation of gene expression #Transcriptome #Transposable element
- Hemoglobin-Gene Cluster Deletions in Antarctic White-Blooded Icefishes Facilitated by Transposable Elements
2025/09/25 by Thomas Desvignes, Angel G. Rivera‐Colón, John H. Postlethwait · 1 voice · 2 citations
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Fish biology, ecology, and behavior #Gene #Gene cluster #Gene duplication #Hemoglobin #Hemoglobin structure and function #Intron #Phylogenetics #Physiological and biochemical adaptations #Transposable element #myr
- DNA methylation contributes to plant acclimation to naturally fluctuating light
2025/09/20 by Robyn Emmerson, Philip Davey, Mouesanao Kandjoze +3 · 1 voice · 3 citations
Agricultural and Biological Sciences · #Acclimatization #Arabidopsis #Arabidopsis thaliana #DNA methylation #Epigenetics #Gene #Light effects on plants #Methylation #Plant Molecular Biology Research #Plant nutrient uptake and metabolism #Transposable element
- Transposable elements are vectors of recurrent transgenerational epigenetic inheritance
2025/09/18 by Pierre Baduel, Louna De Oliveira, Erwann Caillieux +15 · 1 voice · 6 citations
Agricultural and Biological Sciences · #Chromosomal and Genetic Variations #DNA #DNA methylation #Epigenetics #Gene #Inheritance (genetic algorithm) #Legume Nitrogen Fixing Symbiosis #Phenotype #Plant Molecular Biology Research #Transgenerational epigenetics #Transposable element
- Sanctuary : a Starship transposon facilitating the movement of the virulence factor ToxA in fungal wheat pathogens
2025/09/04 by Angus Bucknell, Hannah M. Wilson, Karen Cristine Gonçalves dos Santos +6 · 1 voice · 4 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Biology #Bipolaris #Botany #Gene #Genetics #Genome #Horizontal gene transfer #Insertion sequence #Mobile genetic elements #Plant Disease Resistance and Genetics #Plant Pathogens and Fungal Diseases #Sleeping Beauty transposon system #Transposable element #Transposase #Transposon mutagenesis #Wheat and Barley Genetics and Pathology
- Rapid emergence of non-autonomous elements may stop P-element invasions in the absence of a piRNA-based host defence
2025/08/20 by Matthew Beaumont, Divya Selvaraju, Riccardo Pianezza +1 · 1 voice · 1 citation
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Advanced biosensing and bioanalysis techniques #Biology #CRISPR and Genetic Engineering #Chromosomal and Genetic Variations #Demography #Drosophila melanogaster #Evolutionary biology #Extinction (optical mineralogy) #Gene #Genetics #Genome #Horizontal gene transfer #Host (biology) #Melanogaster #Paleontology #Piwi-interacting RNA #Population #Transposable element
- How Did Evolution Halve Genome Size During an Oceanic Island Colonization?
2025/08/15 by Vadim A. Pisarenco, Adrià Boada-Figueras, Marta Olivé‐Muñiz +7 · 3 voices · 1 citation
Biochemistry, Genetics and Molecular Biology · #Biology #Effective population size #Evolutionary biology #Gene #Genetic diversity and population structure #Genetic variation #Genetics #Genome #Genome evolution #Genome size #Genomics and Phylogenetic Studies #Natural selection #Population #Spider Taxonomy and Behavior Studies #Transposable element
- Chromosomal Inversions Mediated by Tandem Insertions of Transposable Elements
2025/07/30 by Robin Aasegg Araya, William B. Reinar, Ole K. Tørresen +9 · 2 voices · 8 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Biology #Breakpoint #Chromosomal and Genetic Variations #Chromosomal inversion #Chromosome #Ecotype #Evolutionary biology #Gene #Genetic diversity and population structure #Genetics #Genome #Genomics and Phylogenetic Studies #Inverted repeat #Karyotype #Tandem exon duplication #Tandem repeat #Transposable element
- Long-read RNA sequencing of transposable elements from single cells using CELLO-seq
2025/07/16 by Sophie A. Marlow, S.A. Marlow, Lauryn A. Deaville +1 · 2 voices · 2 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Biology #Chromosomal and Genetic Variations #Computational biology #DNA sequencing #Gene #Gene expression #Genetics #Genome #Genomics and Phylogenetic Studies #RNA #RNA modifications and cancer #RNA-Seq #Transcriptome #Transposable element
- The Fire Ant Social Chromosome Exerts a Major Influence on Genome Regulation
2025/05/23 by Beryl M. Jones, Alex H Waugh, Michael A. Catto +5 · 1 voice · 1 citation
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Allele #Biology #Chromatin #Chromosomal and Genetic Variations #Ecology #Enhancer #Evolutionary biology #Gene #Genetics #Genome #Haplotype #Insect Resistance and Genetics #Insect and Arachnid Ecology and Behavior #Regulation of gene expression #Supergene (geology) #Transcription factor #Transposable element
- An endogenous retroviral element co-opts an upstream regulatory sequence to achieve somatic expression and mobility
2025/05/23 by Natalia Rubanova, Darshika Singh, Louis Barolle +6 · 1 voice · 2 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Biology #CRISPR and Genetic Engineering #Chromosomal and Genetic Variations #Endogenous retrovirus #Gene #Genetics #Genome #Locus (genetics) #Long terminal repeat #Nematode management and characterization studies #Regulatory sequence #Retrotransposon #Somatic cell #Transcription factor #Transposable element
- Giant transposons promote strain heterogeneity in a major fungal pathogen
2025/05/12 by Emile Gluck‐Thaler, Adrian Forsythe, Charles Puerner +5 · 1 voice · 4 citations
Biochemistry, Genetics and Molecular Biology · Medicine · #Antifungal resistance and susceptibility #Aspergillus fumigatus #Biology #Gene #Genetic heterogeneity #Genetic variation #Genetics #Genome #Genomics and Phylogenetic Studies #Human pathogen #Microbiology #Pathogen #Phenotype #Plant Pathogens and Fungal Diseases #Strain (injury) #Transposable element #Virulence
- Phylogenomic signatures of repeat-induced point mutations across the fungal kingdom
2025/01/14 by Thomas Badet, Daniel Croll · 1 voice · 2 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Biology #Computational biology #Context (archaeology) #Evolutionary biology #Gene #Genetics #Genome #Genome evolution #Genome size #Genomics #Phylogenetic tree #Plant Disease Resistance and Genetics #Plant Pathogens and Fungal Diseases #Plant-Microbe Interactions and Immunity #Transposable element #Transposon mutagenesis
- Starship giant transposons dominate plastic genomic regions in a fungal plant pathogen and drive virulence evolution
2025/01/09 by Yukiyo Sato, Roos Bex, Grardy C. M. van den Berg +3 · 1 voice · 1 citation
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Biology #Botany #Evolutionary biology #Fungal and yeast genetics research #Fungal protein #Fungus #Gene #Genetics #Genome #Genome evolution #Genomics #Horizontal gene transfer #Plant Pathogens and Fungal Diseases #Plant-Microbe Interactions and Immunity #Saccharomyces cerevisiae #Transposable element #Verticillium #Verticillium dahliae #Virulence
- Gene acquisition by giant transposons primes eukaryotes for rapid evolution via horizontal gene transfer
2024/12/06 by Andrew S. Urquhart, Emile Gluck‐Thaler, Aaron A. Vogan · 1 voice · 12 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Adaptation (eye) #Biology #Computational biology #Evolutionary biology #Gene #Genetics #Genome #Genomics and Phylogenetic Studies #Horizontal gene transfer #Mobile genetic elements #Plant Pathogens and Fungal Diseases #Plant-Microbe Interactions and Immunity #Transposable element
- The PIWI-interacting protein Gtsf1 controls the selective degradation of small RNAs in Paramecium
2024/11/22 by Olivia Charmant, Julita Gruchota, Olivier Arnaiz +9 · 3 voices · 6 citations
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Argonaute #Biology #Cell biology #Gene #Genetics #Genome #Genomics and Phylogenetic Studies #Germline #Microbial Community Ecology and Physiology #Negative selection #Paramecium #Piwi-interacting RNA #Protein degradation #Protist diversity and phylogeny #RNA #RNA interference #RasiRNA #Somatic cell #Transposable element
- L1-ORF1p nucleoprotein can rapidly assume distinct conformations and simultaneously bind more than one nucleic acid
2024/11/20 by Ben A Cashen, M. Nabuan Naufer, Michael Morse +5 · 1 voice · 5 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Base sequence #Biochemistry #Biology #CRISPR and Genetic Engineering #Chromatin #Chromosomal and Genetic Variations #DNA #Deoxyribonuclease I #Gene #Genetics #Genome #Linker DNA #Molecular biology #Nuclease #Nucleic acid #Nucleoprotein #Nucleosome #RNA #RNA and protein synthesis mechanisms #Retrotransposon #Reverse transcriptase #Ribonucleoprotein #Transposable element
- Extensive binding of nebulous human transcription factors to genomic dark matter
2024/11/12 by Rozita Razavi, Ali Fathi, Isaac Yellan +16 · 2 voices · 7 citations
Biochemistry, Genetics and Molecular Biology · #Biology #CRISPR and Genetic Engineering #Chromatin #Computational biology #Enhancer #Evolutionary biology #Gene #Gene expression #Genetics #Genome #Genomics and Chromatin Dynamics #Human genome #Promoter #RNA and protein synthesis mechanisms #Transcription factor #Transposable element
- Intragenomic conflicts with plasmids and chromosomal mobile genetic elements drive the evolution of natural transformation within species
2024/10/14 by Fanny Mazzamurro, Jason Baby Chirakadavil, Isabelle Durieux +7 · 1 voice · 2 citations
Biochemistry, Genetics and Molecular Biology · #Adaptation (eye) #Antibiotic Resistance in Bacteria #Bacteriophage #Biology #Evolutionary biology #Gene #Genetics #Genome #Genomic island #Legionella and Acanthamoeba research #Mobile genetic elements #Plasmid #Prophage #Transformation (genetics) #Transposable element #Vibrio bacteria research studies
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