- deeptime: an R package that facilitates highly customizable and reproducible visualizations of data over geological time intervals
2025/08/05 by William Gearty · 2 voices · 4 citations
Computer Science · Earth and Planetary Sciences · Environmental Science · #Computational Physics and Python Applications #Computer science #Database #Geological Modeling and Analysis #Programming language #R package #Soil Geostatistics and Mapping
- ASTER: A Package for Large-Scale Phylogenomic Reconstructions
2025/07/16 by Chao Zhang, Rasmus Nielsen, Siavash Mirarab · 1 voice · 28 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Mathematics · #Advanced Spaceborne Thermal Emission and Reflection Radiometer #Artificial intelligence #Biology #Chromosomal and Genetic Variations #Combinatorics #Computational biology #Computational science #Computer network #Computer science #Database #Gene #Genetic diversity and population structure #Genetics #Genome #Genomics and Phylogenetic Studies #Geography #Inference #Mathematics #Network topology #Phylogenetic tree #Phylogenomics #R package #Remote sensing #Scalability #Tree (set theory)
- tskitargvisualizer: interactive plotting of ancestral recombination graphs
2024/12/26 by James Kitchens, Yan Wong · 2 citations
Biochemistry, Genetics and Molecular Biology · Social Sciences · #Documentation #Genetics, Bioinformatics, and Biomedical Research #Genomics and Phylogenetic Studies #Index (typography) #Language and cultural evolution #Python (programming language) #R package
- Analyzing categorical time series with the R package ctsfeatures
2023/04/24 by Ángel López Oriona, Oriona, Ángel López, José Antonio Vilar Fernández +1 · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · Economics, Econometrics and Finance · #Anomaly detection #Artificial intelligence #Categorical variable #Cluster analysis #Complex Systems and Time Series Analysis #Computer science #Data mining #Data science #FOS: Computer and information sciences #Machine Learning (cs.LG) #Machine Learning (stat.ML) #Machine learning #Metabolomics and Mass Spectrometry Studies #Outlier #R package #Series (stratigraphy) #Set (abstract data type) #Time Series Analysis and Forecasting #Time series #Variety (cybernetics)
- Sensitivity and robustness analysis in Bayesian networks with the bnmonitor R package
2021/07/25 by Manuele Leonelli, Ramsiya Ramanathan, Leonelli, Manuele +3 · 6 citations
Computer Science · Decision Sciences · Engineering · Mathematics · #Artificial Intelligence (cs.AI) #Artificial intelligence #Bayesian Modeling and Causal Inference #Bayesian network #Bayesian probability #Computer science #Data mining #Engineering #FOS: Computer and information sciences #Machine learning #Methodology (stat.ME) #R package #Risk and Safety Analysis #Robustness (evolution) #Sensitivity (control systems) #Software #cs.AI #stat.ME
- BoXHED2.0: Scalable Boosting of Dynamic Survival Analysis
2021/03/23 by Arash Pakbin, Xiaochen Wang, Pakbin, Arash +5 · 1 citation
Materials Science · Mathematics · #Boosting (machine learning) #Censoring (clinical trials) #Computer science #Covariate #Econometrics #Estimator #Machine Learning in Materials Science #Machine learning #Mathematics #Nonparametric statistics #Operating system #Parametric statistics #Programming language #Python (programming language) #R package #Scalability #Statistical Methods and Inference #Statistics
- Bayesian random-effects meta-analysis using the bayesmeta R package
2017/11/30 by Christian Röver · 2 citations
Decision Sciences · Economics, Econometrics and Finance · Mathematics · #Artificial intelligence #Bayesian inference #Bayesian probability #Computer science #Context (archaeology) #Data mining #Economic and Environmental Valuation #Inference #Meta-analysis #Meta-analysis and systematic reviews #Programming language #R package #Random effects model #Range (aeronautics) #Statistical Methods and Bayesian Inference #stat.CO
- Visualizing Count Data Regressions Using Rootograms
2016/04/27 by Christian Kleiber, Achim Zeileis · 29 citations
Computer Science · Mathematics · #Census and Population Estimation #Count data #Data Analysis with R #Data set #Goodness of fit #Negative binomial distribution #R package #Regression analysis #Replication (statistics) #Sample (material) #Set (abstract data type) #Statistical Methods and Bayesian Inference #stat.AP
- Stylometry with R: A Package for Computational Text Analysis
2016/01/01 by Maciej Eder, Jan Rybicki, Mike Kestemont · 2 citations
Arts and Humanities · Computer Science · #Digital Humanities and Scholarship #Authorship Attribution and Profiling #Advanced Text Analysis Techniques #R package #Stylometry #Computer science #Natural language processing #Programming language
- parallelMCMCcombine: An R Package for Bayesian Methods for Big Data and Analytics
2014/09/26 by Alexey Miroshnikov, Erin M. Conlon, Erin Conlon · 1 citation
Computer Science · Mathematics · #Artificial intelligence #Bayesian Methods and Mixture Models #Bayesian average #Bayesian inference #Bayesian probability #Big data #Computer science #Data mining #Data set #Markov chain Monte Carlo #Posterior probability #R package #Statistical Methods and Bayesian Inference #Statistical Methods and Inference #Variable-order Bayesian network #stat.AP
- SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data
2010/09/27 by Murray P. Cox, Daniel A. Peterson, Patrick J. Biggs · 3 citations
Biochemistry, Genetics and Molecular Biology · Engineering · #Genomics and Phylogenetic Studies #Genomics and Rare Diseases #Cancer Genomics and Diagnostics #Computer science #Downstream (manufacturing) #Software #DNA sequencing #Graphics #Data mining #Software package #R package #Sequence (biology) #Quality (philosophy) #Biology #DNA #Genetics #Programming language #Engineering #Operating system
- Holistic Package Design and Consumer Brand Impressions
2008/05/01 by Ulrich R. Orth, Keven Malkewitz · 18 citations
Business, Management and Accounting · Engineering · #Advertising #Artificial intelligence #Business #Computer science #Computer security #Consumer Behavior in Brand Consumption and Identification #Consumer Packaging Perceptions and Trends #Design Education and Practice #Design elements and principles #Engineering #Engineering drawing #Key (lock) #Marketing #Natural (archaeology) #Package design #R package #Selection (genetic algorithm) #Software engineering
- Validating module network learning algorithms using simulated data
2007/05/01 by Tom Michoel, Steven Maere, Eric Bonnet +8 · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · #Data Visualization and Analytics #Data modeling #Gene Regulatory Network Analysis #Learning network #Neural Networks and Applications #R package #Software #Test (biology) #Test data #q-bio.MN #q-bio.QM
- Asymptotic properties of covariate-adjusted response-adaptive designs
2006/10/17 by Zhang Li, Li-Xin Zhang, Feifang Hu +2 · 2 citations
Computer Science · Decision Sciences · Mathematics · Medicine · #Adaptive design #Advanced Multi-Objective Optimization Algorithms #Artificial intelligence #Clinical trial #Computer science #Contrast (vision) #Covariate #Econometrics #Generalized linear model #Linear model #Logistic regression #Mathematical optimization #Mathematics #Medicine #Optimal Experimental Design Methods #R package #Statistical Methods in Clinical Trials #Statistics #math.PR #math.ST #msc:60F05 #msc:60F15 #msc:60G10 #msc:62G10 #stat.ME #stat.TH
- A Lego System for Conditional Inference
2006/07/18 by Torsten Hothorn, Kurt Hornik, Mark A van de Wiel +2 · 51 citations
Mathematics · #Algorithm #Artificial intelligence #Computer science #Contingency table #Data mining #Inference #Machine learning #Mathematics #Permutation (music) #Programming language #R package #Resampling #Statistical Methods and Bayesian Inference #Statistical Methods and Inference #Statistical Methods in Clinical Trials #Statistical hypothesis testing #Statistical inference #Statistics #Theoretical computer science