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Tan, Cheng

  1. A Survey on Generative Diffusion Model
    2022/09/06 by Hanqun Cao, Cao, Hanqun, Cheng Tan +12 · 1 voice · 54 citations
    Business, Management and Accounting · Computer Science · Medicine · Psychology · #Artificial Intelligence (cs.AI) #Artificial Intelligence in Healthcare and Education #Creativity in Education and Neuroscience #FOS: Computer and information sciences #Private Equity and Venture Capital #cs.AI
  2. Magentic-UI: Towards Human-in-the-loop Agentic Systems
    2025/07/30 by Hussein Mozannar, Gagan Bansal, Mozannar, Hussein +37 · 4 voices · 22 citations
    #cs.AI #cs.HC
  3. Magentic-One: A Generalist Multi-Agent System for Solving Complex Tasks
    2024/11/07 by Adam Fourney, Gagan Bansal, Fourney, Adam +35 · 61 citations
    Decision Sciences · Computer Science · #Complex Systems and Decision Making #AI-based Problem Solving and Planning #Multi-Agent Systems and Negotiation
  4. SimVP: Simpler yet Better Video Prediction
    2022/06/09 by Zhangyang Gao, Gao, Zhangyang, Cheng Tan +5 · 23 citations
    Computer Science · #Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Generative Adversarial Networks and Image Synthesis #Human Pose and Action Recognition #Multimodal Machine Learning Applications
  5. Temporal Attention Unit: Towards Efficient Spatiotemporal Predictive Learning
    2022/06/24 by Cheng Tan, Tan, Cheng, Zhangyang Gao +7 · 11 citations
    Computer Science · #Human Pose and Action Recognition #Domain Adaptation and Few-Shot Learning #Video Surveillance and Tracking Methods
  6. MogaNet: Multi-order Gated Aggregation Network
    2022/11/07 by Siyuan Li, Li, Siyuan, Zedong Wang +15 · 11 citations
    Computer Science · #Advanced Neural Network Applications #Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Human Pose and Action Recognition #Video Surveillance and Tracking Methods
  7. SimVPv2: Towards Simple yet Powerful Spatiotemporal Predictive Learning
    2022/11/22 by Cheng Tan, Zhangyang Gao, Tan, Cheng +5 · 10 citations
    Computer Science · #Domain Adaptation and Few-Shot Learning #Data Stream Mining Techniques #Machine Learning and Data Classification
  8. Self-supervised Learning on Graphs: Contrastive, Generative,or Predictive
    2021/05/16 by Lirong Wu, Wu, Lirong, Haitao Lin +7 · 6 citations
    Computer Science · #Advanced Graph Neural Networks #Artificial Intelligence (cs.AI) #FOS: Computer and information sciences #Machine Learning (cs.LG) #Sentiment Analysis and Opinion Mining #Text and Document Classification Technologies
  9. CONVERT:Contrastive Graph Clustering with Reliable Augmentation
    2023/08/17 by Xihong Yang, Cheng Tan, Yang, Xihong +17 · 10 citations
    Computer Science · Social Sciences · #Advanced Graph Neural Networks #Recommender Systems and Techniques #Human Mobility and Location-Based Analysis
  10. MLIP: Enhancing Medical Visual Representation with Divergence Encoder and Knowledge-guided Contrastive Learning
    2024/02/03 by Zhe Li, Laurence T. Yang, Li, Zhe +11 · 10 citations
    Computer Science · #AI in cancer detection #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Image Retrieval and Classification Techniques
  11. CVT-SLR: Contrastive Visual-Textual Transformation for Sign Language Recognition with Variational Alignment
    2023/03/10 by Jiangbin Zheng, Yile Wang, Zheng, Jiangbin +13 · 6 citations
    Computer Science · Engineering · Psychology · #Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Gait Recognition and Analysis #Hand Gesture Recognition Systems #Hearing Impairment and Communication
  12. Boosting the Power of Small Multimodal Reasoning Models to Match Larger Models with Self-Consistency Training
    2023/11/23 by Cheng Tan, Jingxuan Wei, Tan, Cheng +10 · 8 citations
    Computer Science · #Topic Modeling #Multimodal Machine Learning Applications #Natural Language Processing Techniques
  13. Peer Review as A Multi-Turn and Long-Context Dialogue with Role-Based Interactions
    2024/06/09 by Cheng Tan, Dongxin Lyu, Tan, Cheng +13 · 9 citations
    Decision Sciences · #Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #FOS: Computer and information sciences #Interdisciplinary Research and Collaboration #Machine Learning (cs.LG)
  14. Serving DNN Models with Multi-Instance GPUs: A Case of the Reconfigurable Machine Scheduling Problem
    2021/09/18 by Tan, Cheng, Li, Zhichao, Zhang, Jian +5 · 4 citations
    #Distributed #FOS: Computer and information sciences #Machine Learning (cs.LG) #Parallel #and Cluster Computing (cs.DC)
  15. PiFold: Toward effective and efficient protein inverse folding
    2022/09/22 by Gao, Zhangyang, Tan, Cheng, Chacón, Pablo +1 · 4 citations
    #Artificial Intelligence (cs.AI) #Computational Engineering #FOS: Computer and information sciences #Finance #Machine Learning (cs.LG) #and Science (cs.CE)
  16. SemiReward: A General Reward Model for Semi-supervised Learning
    2023/10/04 by Siyuan Li, Weiyang Jin, Li, Siyuan +11 · 5 citations
    Mathematics · #Advanced Statistical Methods and Models #Artificial Intelligence (cs.AI) #FOS: Computer and information sciences #Machine Learning (cs.LG)
  17. CBGBench: Fill in the Blank of Protein-Molecule Complex Binding Graph
    2024/06/16 by Haitao Lin, Guojiang Zhao, Lin, Haitao +17 · 7 citations
    Biochemistry, Genetics and Molecular Biology · #Artificial Intelligence (cs.AI) #Bioinformatics and Genomic Networks #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG)
  18. General Point Model with Autoencoding and Autoregressive
    2023/10/25 by Zhe Li, Zhangyang Gao, Li, Zhe +7 · 5 citations
    Materials Science · Computer Science · #Machine Learning in Materials Science #Advanced Neural Network Applications
  19. OpenSTL: A Comprehensive Benchmark of Spatio-Temporal Predictive Learning
    2023/06/20 by Cheng Tan, Tan, Cheng, Siyuan Li +13 · 4 citations
    Computer Science · #Anomaly Detection Techniques and Applications #Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Time Series Analysis and Forecasting #Video Surveillance and Tracking Methods
  20. From Words to Structured Visuals: A Benchmark and Framework for Text-to-Diagram Generation and Editing
    2024/11/18 by Jingxuan Wei, Cheng Tan, Wei, Jingxuan +15 · 8 citations
    Computer Science · #Model-Driven Software Engineering Techniques
  21. Re-Dock: Towards Flexible and Realistic Molecular Docking with Diffusion Bridge
    2024/02/18 by Yufei Huang, Huang, Yufei, Odin Zhang +13 · 4 citations
    Computer Science · Engineering · #Artificial Intelligence (cs.AI) #Biomolecules (q-bio.BM) #Chemical Physics (physics.chem-ph) #FOS: Biological sciences #FOS: Computer and information sciences #FOS: Physical sciences #Machine Learning (cs.LG) #Molecular Communication and Nanonetworks #Molecular Junctions and Nanostructures #Quantum-Dot Cellular Automata
  22. Retrieval Meets Reasoning: Even High-school Textbook Knowledge Benefits Multimodal Reasoning
    2024/05/31 by Cheng Tan, Jingxuan Wei, Tan, Cheng +13 · 4 citations
    Psychology · Social Sciences · #Educational Strategies and Epistemologies #Education and Critical Thinking Development #Innovative Teaching and Learning Methods
  23. Target-aware Molecular Graph Generation
    2022/02/10 by Tan, Cheng, Gao, Zhangyang, Li, Stan Z. · 2 citations
    #Artificial Intelligence (cs.AI) #FOS: Computer and information sciences #Machine Learning (cs.LG)
  24. I-GCN: A Graph Convolutional Network Accelerator with Runtime Locality Enhancement through Islandization
    2022/03/07 by Tong Geng, Geng, Tong, Chunshu Wu +15 · 2 citations
    Computer Science · Engineering · #Advanced Graph Neural Networks #Advanced Memory and Neural Computing #FOS: Computer and information sciences #Ferroelectric and Negative Capacitance Devices #Hardware Architecture (cs.AR) #Machine Learning (cs.LG)
  25. Masked Modeling for Self-supervised Representation Learning on Vision and Beyond
    2023/12/31 by Siyuan Li, Luyuan Zhang, Li, Siyuan +19 · 3 citations
    Computer Science · #Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #Domain Adaptation and Few-Shot Learning #FOS: Computer and information sciences #Human Pose and Action Recognition #Multimodal Machine Learning Applications
  26. GenBench: A Benchmarking Suite for Systematic Evaluation of Genomic Foundation Models
    2024/06/01 by Zicheng Liu, Jiahui Li, Liu, Zicheng +13 · 4 citations
    Biochemistry, Genetics and Molecular Biology · #Cancer Genomics and Diagnostics #Gene expression and cancer classification #Genomics and Phylogenetic Studies
  27. VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling
    2024/05/13 by Li, Siyuan, Wang, Zedong, Liu, Zicheng +5 · 4 citations
    #Artificial Intelligence (cs.AI) #FOS: Biological sciences #FOS: Computer and information sciences #Genomics (q-bio.GN)
  28. PipeLLM: Fast and Confidential Large Language Model Services with Speculative Pipelined Encryption
    2024/11/04 by Tan, Yifan, Tan, Cheng, Mi, Zeyu +1 · 4 citations
    #Cryptography and Security (cs.CR) #Distributed #FOS: Computer and information sciences #Parallel #and Cluster Computing (cs.DC)
  29. PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein Interaction Prediction
    2024/02/13 by Wu, Lirong, Huang, Yufei, Tan, Cheng +5 · 3 citations
    #Artificial Intelligence (cs.AI) #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG)
  30. Imaging magnetic switching in orthogonally twisted stacks of a van der Waals antiferromagnet
    2024/10/24 by Healey, Alexander J, Tan, Cheng, Gross, Boris +9 · 3 citations
    #Applied Physics (physics.app-ph) #FOS: Physical sciences #Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
  31. RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design
    2023/01/25 by Tan, Cheng, Zhang, Yijie, Gao, Zhangyang +4 · 2 citations
    #Artificial Intelligence (cs.AI) #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG)
  32. Ultrafast Graphene Light Emitter
    2017/10/24 by Young Duck Kim, Kim, Young Duck, Yuanda Gao +37 · 1 citation
    Engineering · Physics and Astronomy · #Advanced Fiber Laser Technologies #Applied Physics (physics.app-ph) #FOS: Physical sciences #Materials Science (cond-mat.mtrl-sci) #Mesoscale and Nanoscale Physics (cond-mat.mes-hall) #Strong Light-Matter Interactions #Thermal Radiation and Cooling Technologies
  33. Switch EMA: A Free Lunch for Better Flatness and Sharpness
    2024/02/14 by Li, Siyuan, Liu, Zicheng, Tian, Juanxi +9 · 2 citations
    #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Machine Learning (cs.LG)
  34. Enhancing Human-like Multi-Modal Reasoning: A New Challenging Dataset and Comprehensive Framework
    2023/07/24 by Jingxuan Wei, Wei, Jingxuan, Cheng Tan +13 · 2 citations
    Computer Science · #Artificial Intelligence (cs.AI) #FOS: Computer and information sciences #Multimodal Machine Learning Applications #Natural Language Processing Techniques #Topic Modeling
  35. Intrinsic new properties of a quantum spin liquid
    2021/02/18 by Yang, Yanxing, Li, Xin, Tan, Cheng +10 · 1 citation
    #FOS: Physical sciences #Materials Science (cond-mat.mtrl-sci) #Strongly Correlated Electrons (cond-mat.str-el)
  36. UniIF: Unified Molecule Inverse Folding
    2024/05/29 by Zhangyang Gao, Jue Wang, Gao, Zhangyang +13 · 2 citations
    Biochemistry, Genetics and Molecular Biology · Materials Science · #Artificial Intelligence (cs.AI) #Chemical Synthesis and Analysis #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Quantitative Methods (q-bio.QM) #Synthesis and properties of polymers
  37. GraphMixup: Improving Class-Imbalanced Node Classification on Graphs by Self-supervised Context Prediction
    2021/06/21 by Lirong Wu, Haitao Lin, Wu, Lirong +7 · 1 citation
    Computer Science · #Advanced Graph Neural Networks #Artificial Intelligence (cs.AI) #Domain Adaptation and Few-Shot Learning #FOS: Computer and information sciences #Machine Learning (cs.LG) #Topic Modeling
  38. OpenMixup: Open Mixup Toolbox and Benchmark for Visual Representation Learning
    2022/09/11 by Siyuan Li, Li, Siyuan, Zedong Wang +10 · 2 citations
    Computer Science · Neuroscience · #Computer Vision and Pattern Recognition (cs.CV) #Domain Adaptation and Few-Shot Learning #FOS: Computer and information sciences #Machine Learning and ELM #Neuroinflammation and Neurodegeneration Mechanisms
  39. AlphaDesign: A graph protein design method and benchmark on AlphaFoldDB
    2022/02/01 by Zhangyang Gao, Gao, Zhangyang, Cheng Tan +3 · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Artificial Intelligence (cs.AI) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Machine Learning in Bioinformatics #Microbial Metabolic Engineering and Bioproduction #Protein Structure and Dynamics #Quantitative Methods (q-bio.QM)
  40. Generative De Novo Protein Design with Global Context
    2022/04/21 by Cheng Tan, Zhangyang Gao, Tan, Cheng +5 · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Protein Structure and Dynamics #Machine Learning in Bioinformatics #RNA and protein synthesis mechanisms
  41. MergeVQ: A Unified Framework for Visual Generation and Representation with Disentangled Token Merging and Quantization
    2025/04/01 by Siyuan Li, Li, Siyuan, Luyuan Zhang +19 · 4 citations
    Computer Science · #Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #Domain Adaptation and Few-Shot Learning #FOS: Computer and information sciences #Generative Adversarial Networks and Image Synthesis #Multimodal Machine Learning Applications
  42. SemiRetro: Semi-template framework boosts deep retrosynthesis prediction
    2022/02/12 by Zhangyang Gao, Cheng Tan, Gao, Zhangyang +5 · 1 citation
    Materials Science · Biochemistry, Genetics and Molecular Biology · #Machine Learning in Materials Science #Genomics and Phylogenetic Studies #Machine Learning in Bioinformatics
  43. Muon Spin Relaxation Study of Spin Dynamics on a Kitaev honeycomb material H3LiIr2O6
    2022/01/31 by Yang, Yan-Xing, Jiang, Cheng-Yu, Huang, Liang-Long +13 · 1 citation
    #FOS: Physical sciences #Strongly Correlated Electrons (cond-mat.str-el)
  44. A Survey of Scientific Large Language Models: From Data Foundations to Agent Frontiers
    2025/08/28 by Mingjun Hu, Chenglong Ma, Hu, Ming +214 · 9 citations
    Computer Science · Materials Science · Medicine · #Artificial Intelligence (cs.AI) #Artificial Intelligence in Healthcare and Education #Computation and Language (cs.CL) #FOS: Computer and information sciences #Machine Learning in Materials Science #Topic Modeling
  45. DiffSDS: A language diffusion model for protein backbone inpainting under geometric conditions and constraints
    2023/01/22 by Zhangyang Gao, Gao, Zhangyang, Cheng Tan +3 · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Artificial Intelligence (cs.AI) #FOS: Biological sciences #FOS: Computer and information sciences #Genomics and Chromatin Dynamics #Machine Learning (cs.LG) #Machine Learning in Bioinformatics #Protein Structure and Dynamics #Quantitative Methods (q-bio.QM)
  46. Harnessing Hard Mixed Samples with Decoupled Regularizer
    2022/03/21 by Zicheng Liu, Liu, Zicheng, Siyuan Li +9 · 1 citation
    Computer Science · #Advanced Neural Network Applications #Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #Domain Adaptation and Few-Shot Learning #FOS: Computer and information sciences #Machine Learning (cs.LG) #Machine Learning and Data Classification
  47. Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective
    2022/12/02 by Cheng Tan, Zhangyang Gao, Tan, Cheng +8 · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Artificial Intelligence (cs.AI) #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Machine Learning in Bioinformatics #Protein Structure and Dynamics #RNA and protein synthesis mechanisms
  48. Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer
    2023/04/21 by Cheng Tan, Zhangyang Gao, Tan, Cheng +8 · 1 citation
    Biochemistry, Genetics and Molecular Biology · Immunology and Microbiology · Medicine · #Artificial Intelligence (cs.AI) #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Glycosylation and Glycoproteins Research #Immunotherapy and Immune Responses #Machine Learning (cs.LG) #Monoclonal and Polyclonal Antibodies Research
  49. MeToken: Uniform Micro-environment Token Boosts Post-Translational Modification Prediction
    2024/11/04 by Cheng Tan, Tan, Cheng, Zhangyang Gao +14 · 2 citations
    Biochemistry, Genetics and Molecular Biology · Computer Science · #Biomolecules (q-bio.BM) #Computational Drug Discovery Methods #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Protein Degradation and Inhibitors
  50. Dropout Attacks
    2023/09/04 by Andrew Yuan, Yuan, Andrew, Alina Oprea +3 · 1 citation
    Computer Science · #Advanced Neural Network Applications #Adversarial Robustness in Machine Learning #Anomaly Detection Techniques and Applications #Cryptography and Security (cs.CR) #FOS: Computer and information sciences #Machine Learning (cs.LG)
  51. ProtInvTree: Deliberate Protein Inverse Folding with Reward-guided Tree Search
    2025/06/01 by Liu, Mengdi, Xiaoxue Cheng, Cheng, Xiaoxue +10 · 3 citations
    Biochemistry, Genetics and Molecular Biology · Engineering · #Advanced Materials and Mechanics #Biomolecules (q-bio.BM) #Computer Vision and Pattern Recognition (cs.CV) #FOS: Biological sciences #FOS: Computer and information sciences #Glycosylation and Glycoproteins Research #Machine Learning (cs.LG)
  52. FoldToken: Learning Protein Language via Vector Quantization and Beyond
    2024/02/04 by Gao, Zhangyang, Tan, Cheng, Wang, Jue +3 · 1 citation
    #Artificial Intelligence (cs.AI) #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG)
  53. dyAb: Flow Matching for Flexible Antibody Design with AlphaFold-driven Pre-binding Antigen
    2025/03/01 by Tan, Cheng, Zhang, Yijie, Gao, Zhangyang +6 · 2 citations
    #Artificial Intelligence (cs.AI) #FOS: Biological sciences #FOS: Computer and information sciences #Quantitative Methods (q-bio.QM)
  54. LLM Jailbreak Oracle
    2025/06/17 by Lin, Shuyi, Suri, Anshuman, Oprea, Alina +1 · 3 citations
    #Artificial Intelligence (cs.AI) #Cryptography and Security (cs.CR) #FOS: Computer and information sciences #Machine Learning (cs.LG)
  55. PFMBench: Protein Foundation Model Benchmark
    2025/06/01 by Zhangyang Gao, Gao, Zhangyang, Hao Wang +15 · 2 citations
    Biochemistry, Genetics and Molecular Biology · #Artificial Intelligence (cs.AI) #Bioinformatics and Genomic Networks #Biomedical Text Mining and Ontologies #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Microbial Metabolic Engineering and Bioproduction
  56. FoldToken2: Learning compact, invariant and generative protein structure language
    2024/06/11 by Zhangyang Gao, Gao, Zhangyang, Cheng Tan +3 · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Artificial Intelligence (cs.AI) #Biomedical Text Mining and Ontologies #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Machine Learning in Bioinformatics #Protein Structure and Dynamics
  57. A Sharded Blockchain-Based Secure Federated Learning Framework for LEO Satellite Networks
    2024/11/09 by Wu, Wenbo, Tan, Cheng, Yang, Kangcheng +3 · 1 citation
    #Cryptography and Security (cs.CR) #Distributed #FOS: Computer and information sciences #Parallel #and Cluster Computing (cs.DC)
  58. AlphaFold Database Debiasing for Robust Inverse Folding
    2025/06/10 by Tan, Cheng, Cao, Zhenxiao, Gao, Zhangyang +3 · 1 citation
    #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG)
  59. Advances of Deep Learning in Protein Science: A Comprehensive Survey
    2024/03/08 by Bozhen Hu, Cheng Tan, Hu, Bozhen +17 · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Genetics, Bioinformatics, and Biomedical Research #Machine Learning in Bioinformatics #Cell Image Analysis Techniques
  60. TrainVerify: Equivalence-Based Verification for Distributed LLM Training
    2025/06/19 by Lu, Yunchi, Miao, Youshan, Tan, Cheng +4 · 2 citations
    #Artificial Intelligence (cs.AI) #Distributed #FOS: Computer and information sciences #Machine Learning (cs.LG) #Parallel #and Cluster Computing (cs.DC)
  61. ODesign: A World Model for Biomolecular Interaction Design
    2025/10/25 by Zhang, Odin, Zhang, Xujun, Lin, Haitao +34 · 1 citation
    #Biomolecules (q-bio.BM) #FOS: Biological sciences