- Sassy: fuzzy searching DNA sequences using SIMD
2026/05/01 by Rick Beeloo, Ragnar Groot Koerkamp · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · #Algorithms and Data Compression #Approximate string matching #Binary number #Contig #Genome Rearrangement Algorithms #Matching (statistics) #Network Packet Processing and Optimization #Pattern matching #SIMD #Search engine indexing #Sequence (biology) #String (physics) #String searching algorithm
- Base64 encoding and decoding at almost the speed of a memory copy
2019/10/02 by Wojciech Muła, Daniel Lemire · 6 voices · 1 citation
Computer Science · #Advanced Data Storage Technologies #Algorithms and Data Compression #Artificial intelligence #Computer science #Decoding methods #ENCODE #Encoding (memory) #Executable #JSON #Operating system #Parallel Computing and Optimization Techniques #Parallel computing #Porting #Programming language #SIMD #Software #XML #cs.DC