1. Models
   2026/06/10 by Olivia Guest · 2 voices
   Arts and Humanities · Neuroscience · Psychology · #Child and Animal Learning Development #Cognition #Complexity science #Computational model #Embodied and Extended Cognition #Perspective (graphical) #Philosophy and History of Science #Scientific discovery #Scientific modelling
2. Understanding Artificial Neural Networks: Mysterianism about Known Mechanism is Mysticism
   2026/05/07 by Olivia Guest, Nancy Abigail Nuñez Hernández, Mark Blokpoel · 3 voices
   Computer Science · Neuroscience · #Artificial neural network #Black box #Cognitive Science and Education Research #Computability, Logic, AI Algorithms #Computational model #Embodied and Extended Cognition #Function (biology) #GRASP #Mechanism (biology) #Property (philosophy)
3. Understanding Artificial Neural Networks: Mysterianism about Known Mechanism is Mysticism
   2026/05/07 by Olivia Guest, Nancy Abigail Nuñez Hernández, Mark Blokpoel · 2 voices
   Computer Science · Neuroscience · #Artificial neural network #Black box #Cognitive Science and Education Research #Computability, Logic, AI Algorithms #Computational model #Embodied and Extended Cognition #Function (biology) #GRASP #Mechanism (biology) #Property (philosophy)
4. Why in vivo models of disease remain indispensable
   2026/04/01 by Debora Bogani, Kirsty Hooper, Owen Sansom · 4 voices
   Biochemistry, Genetics and Molecular Biology · Immunology and Microbiology · Veterinary · #Animal model #Animal testing and alternatives #Complex disease #Computational model #Disease #Immunotoxicology and immune responses #Model validation #Zebrafish Biomedical Research Applications
5. Compartment‐guided assembly of large‐scale molecular models with Bentopy
   2026/02/12 by M. S. S. Westendorp, J. A. Stevens, C. M. Brown +4 · 2 voices · 3 citations
   Biochemistry, Genetics and Molecular Biology · Engineering · Physics and Astronomy · #Advanced Electron Microscopy Techniques and Applications #Bottleneck #Computational model #Force Microscopy Techniques and Applications #Modular design #Molecular model #Nanopore and Nanochannel Transport Studies #Organelle #Representation (politics) #Systems biology #Workflow
6. Cortical traveling waves in time and space: Physics, physiology, and psychology
   2026/02/09 by Jace Cruddas, James C. Pang, Alex Fornito · 1 voice · 1 citation
   Neuroscience · #Brain waves #Computational model #Cortical neurons #Functional Brain Connectivity Studies #Neural dynamics and brain function #Perception #Realization (probability) #Relation (database) #Visual perception and processing mechanisms
7. Beta Burst Waveform Diversity: A Window onto Cortical Computation
   2025/12/09 by Holly Rayson, Quentin Moreau, S. Gailhard +2 · 1 voice · 3 citations
   Medicine · Neuroscience · #BETA (programming language) #Burst mode (computing) #Computation #Computational model #Functional Brain Connectivity Studies #Functional connectivity #Neural activity #Neural dynamics and brain function #Neurological disorders and treatments #Neuromodulation #Perspective (graphical) #Waveform
8. Psilocybin alters visual contextual computations
   2025/11/21 by Marco Aqil, Gilles de Hollander, Nina Vreugdenhil +2 · 1 voice · 1 citation
   Neuroscience · Psychology · #Cognition #Computation #Computational model #Hallucinogen #Pain Management and Placebo Effect #Paranormal Experiences and Beliefs #Perception #Psilocybin #Psychedelics and Drug Studies #Visual cortex #Visual perception
9. Computational Turing Test Reveals Systematic Differences Between Human and AI Language
   2025/11/06 by Nicolò Pagan, Petter Törnberg, Pagan, Nicolò +7 · 4 voices
   Medicine · Psychology · Social Sciences · #Artificial Intelligence in Healthcare and Education #Benchmarking #Computational and Text Analysis Methods #Computational model #Context (archaeology) #Field (mathematics) #Language model #Mental Health via Writing #Scalability #Semantics (computer science) #Turing #Turing test
10. Escaping the Jingle-Jangle Jungle: Increasing Conceptual Clarity in Psychology Using Large Language Models
    2025/10/22 by Dirk U. Wulff, Rui Mata · 1 voice · 4 citations
    Computer Science · Psychology · Social Sciences · #CLARITY #Comparability #Component (thermodynamics) #Computational and Text Analysis Methods #Computational model #Conceptual framework #Conceptual model #Construct (python library) #Mental Health via Writing #Semantics (computer science) #Topic Modeling
11. How Do LLMs Use Their Depth?
    2025/10/21 by Akshat Gupta, Jay Yeung, Gupta, Akshat +5 · 2 voices · 3 citations
    Computer Science · #Causal inference #Computational model #Function (biology) #Inference #Multimodal Machine Learning Applications #Natural Language Processing Techniques #Recall #TRACE (psycholinguistics) #Task (project management) #Topic Modeling #cs.AI #cs.CL
12. Stereochemistry-aware string-based molecular generation
    2025/10/14 by Gary Tom, Edwin Yu, Naruki Yoshikawa +2 · 1 voice · 1 citation
    Biochemistry, Genetics and Molecular Biology · Chemistry · #Chemical Synthesis and Analysis #Chemical space #Computational model #Drug discovery #Generative grammar #Generative model #Reinforcement learning #Supramolecular Chemistry and Complexes #Various Chemistry Research Topics
13. The Temporal Scaffolding of Sensory Organization
    2025/10/01 by Pawan Sinha, Lukas Vogelsang, Marin Vogelsang +2 · 2 voices · 2 citations
    Neuroscience · Psychology · #Centrality #Child and Animal Learning Development #Cognition #Computational model #Meaning (existential) #Neural dynamics and brain function #Neurophysiology #Neuroscience and Music Perception #Perception #Sensory processing #Sensory system
14. Computational design of intrinsically disordered proteins
    2025/09/15 by Giulio Tesei, Tesei, Giulio, Francesco Pesce +4 · 4 voices · 2 citations
    Biochemistry, Genetics and Molecular Biology · Materials Science · #Computational model #Intrinsically disordered proteins #Protein Structure and Dynamics #Protein design #Protein stability #Scalability #Workflow #q-bio.BM
15. Capability-Distributed Resident Intelligence Kernel Model for Deterministic Semantic Operating Systems Based on Interface-Led Architecture
    2025/07/10 by Varin Sikka, Sikka, Varin, Vishal Sikka +1 · 30 voices
    Computer Science · Engineering · #Action (physics) #Computability, Logic, AI Algorithms #Computational linguistics #Computational model #Ferroelectric and Negative Capacitance Devices #Key (lock) #Language model #Machine Learning and Algorithms #Perspective (graphical) #cs.AI #cs.CL
16. The respiratory cycle modulates distinct dynamics of affective and perceptual decision-making
    2025/05/27 by Malthe Brændholt, Niia Nikolova, Melina Vejlø +4 · 1 voice · 4 citations
    Neuroscience · Psychology · #Anxiety, Depression, Psychometrics, Treatment, Cognitive Processes #Artificial intelligence #Biological motion #Breathing #Cognitive psychology #Computational model #Computer science #Dynamics (music) #Neural and Behavioral Psychology Studies #Neural dynamics and brain function #Neuroscience #Perception #Psychology #Task (project management)
17. Beyond Semantics: The Unreasonable Effectiveness of Reasonless Intermediate Tokens
    2025/05/19 by Karthik Valmeekam, Vardhan Palod, Valmeekam, Karthik +7 · 26 voices · 27 citations
    Computer Science · #Analogical reasoning #Computational model #Defeasible reasoning #Multimodal Machine Learning Applications #Natural Language Processing Techniques #Notice #Security token #Semantics (computer science) #Set (abstract data type) #TRACE (psycholinguistics) #Topic Modeling #Verifiable secret sharing #cs.AI #cs.LG
18. Beyond Attention: Toward Machines with Intrinsic Higher Mental States
    2025/05/02 by Ahsan Adeel, Adeel, Ahsan · 6 voices · 1 citation
    Computer Science · Neuroscience · #Cognition #Computational model #Core (optical fiber) #Face Recognition and Perception #Information processing #Mental representation #Multimodal Machine Learning Applications #Neural dynamics and brain function #Perception #Reinforcement learning #Relevance (law) #Representation (politics)
19. Neural mechanisms of predictive processing: a collaborative community experiment through the OpenScope program
    2025/04/13 by Ido Aizenbud, Nicholas Audette, Aizenbud, Ido +107 · 5 voices · 4 citations
    Biochemistry, Genetics and Molecular Biology · Computer Science · #Artificial neural network #Biological neural network #Cognitive Science and Mapping #Computational model #Neural Networks and Applications #Predictive coding #Sensory processing #Sensory system #Stimulus (psychology) #q-bio.NC
20. Naturalistic Computational Cognitive Science: Towards generalizable models and theories that capture the full range of natural behavior
    2025/02/27 by Wilka Carvalho, Carvalho, Wilka, Andrew K. Lampinen +2 · 5 voices · 8 citations
    Neuroscience · Psychology · #Animal cognition #Child and Animal Learning Development #Cognition #Computational model #Embodied and Extended Cognition #Face Recognition and Perception #Natural (archaeology) #Naturalism #Naturalistic observation #Range (aeronautics) #Scope (computer science)
21. The functional role of oscillatory dynamics in neocortical circuits: A computational perspective
    2025/01/23 by Felix Effenberger, Pedro Carvalho, Igor Dubinin +1 · 1 voice · 21 citations
    Engineering · Mathematics · Neuroscience · #Advanced Memory and Neural Computing #Artificial intelligence #Artificial neural network #Computational model #Computer science #Hebbian theory #Mathematics #Modularity (biology) #Network dynamics #Neural dynamics and brain function #Neuroscience #Neuroscience and Neural Engineering
22. Use of Computation Ecosystems to Analyze the Kidney-Heart Crosstalk
    2023/04/13 by Zhuojun Wu, Johannes Lohmöller, Christiane Kuhl +3 · 5 citations
    Engineering · Medicine · #Artificial intelligence #Biology #Cardiovascular Function and Risk Factors #Chronic Kidney Disease and Diabetes #Computational biology #Computational model #Computer science #Crosstalk #Data science #Dialysis and Renal Disease Management #Disease #Engineering #Medicine #Pathology #Systems biology
23. On Logical Inference over Brains, Behaviour, and Artificial Neural Networks
    2023/02/13 by Olivia Guest, Andrea E. Martin · 3 voices · 36 citations
    Arts and Humanities · Computer Science · Neuroscience · Psychology · #Argumentation theory #Artificial intelligence #Cognition #Cognitive model #Cognitive science #Computational model #Computer science #Epistemology #Explainable Artificial Intelligence (XAI) #Inference #Machine learning #Neural dynamics and brain function #Neurocognitive #Neuroscience #Philosophy and History of Science #Psychology #Schema (genetic algorithms)
24. A Revaluation of Computational Thinking in K–12 Education: Moving Toward Computational Literacies
    2021/11/05 by Yasmin B. Kafai, Chris Proctor, C. Patrick Proctor · 6 citations
    Computer Science · Engineering · Psychology · #Artificial intelligence #Computational model #Computational thinking #Computer science #Educational Games and Gamification #Engineering #Identity (music) #Implementation #Innovative Teaching and Learning Methods #Key (lock) #Management science #Mathematics education #Pedagogy #Psychology #Situated #Sociology #Teaching and Learning Programming
25. A multi-approach and multi-scale platform to model CD4+ T cells responding to infections
    2021/08/03 by Kenneth Y. Wertheim, Bhanwar Lal Puniya, Alyssa La Fleur +3 · 1 citation
    Immunology and Microbiology · Medicine · #T-cell and B-cell Immunology #Immune Cell Function and Interaction #Immune Response and Inflammation #Systems biology #Computational biology #Modular design #Computer science #Population #Modularity (biology) #Biology #In silico #Mechanism (biology) #Computational model #Immunology #Artificial intelligence #Gene #Physics #Medicine #Genetics
26. Computational models of atrial fibrillation: achievements, challenges, and perspectives for improving clinical care
    2021/04/22 by Jordi Heijman, Henry Sutanto, Harry J G M Crijns +4 · 27 citations
    Medicine · #Artificial intelligence #Atrial Fibrillation Management and Outcomes #Atrial fibrillation #Bioinformatics #Biology #Cardiac Arrhythmias and Treatments #Cardiac electrophysiology #Cardiac electrophysiology and arrhythmias #Cardiology #Clinical trial #Computational model #Computer science #Disease #Intensive care medicine #Internal medicine #Medicine #Narrative review #Personalized medicine #Psychological intervention #Risk analysis (engineering)
27. How Computational Modeling Can Force Theory Building in Psychological Science
    2021/01/22 by Olivia Guest, Andrea E. Martin · 3 voices · 80 citations
    Arts and Humanities · Mathematics · Neuroscience · Psychology · #Artificial intelligence #Causal inference #Cognitive science #Computational model #Computer science #Data science #Econometrics #Epistemology #Forcing (mathematics) #Functional Brain Connectivity Studies #Inference #Management science #Mathematics #Mental Health Research Topics #Philosophy and History of Science #Philosophy of science #Process (computing) #Psychology #Variety (cybernetics)
28. Sarcasm Analysis using Conversation Context
    2018/08/22 by Debanjan Ghosh, Alexander R. Fabbri, Ghosh, Debanjan +3 · 1 voice · 2 citations
    Computer Science · Psychology · #Advanced Text Analysis Techniques #Artificial intelligence #Communication #Computational model #Computer science #Context (archaeology) #Conversation #Irony #Linguistics #Natural language processing #Psychology #Sarcasm #Sentence #Sentiment Analysis and Opinion Mining #Social media #Topic Modeling #World Wide Web
29. The rise of machine consciousness: Studying consciousness with computational models
    2013/03/26 by James A. Reggia · 2 citations
    Mathematics · Neuroscience · Psychology · #Artificial consciousness #Artificial intelligence #Cognition #Cognitive psychology #Cognitive science #Computational model #Computer science #Consciousness #Face Recognition and Perception #Field (mathematics) #Mathematics #Neural and Behavioral Psychology Studies #Neural correlates of consciousness #Neural dynamics and brain function #Neuroscience #Psychology #Robot #Terminology #Workspace
30. A Joint Computational Respiratory Neural Network-Biomechanical Model for Breathing and Airway Defensive Behaviors
    2012/01/01 by Russell O’Connor, Lauren S. Segers, Kendall F. Morris +5 · 1 citation
    Engineering · Medicine · Neuroscience · #Airway #Anatomy #Anesthesia #Artificial intelligence #Artificial neural network #Biology #Breathing #Computational model #Computer science #Engineering #Heart Rate Variability and Autonomic Control #Joint (building) #Medicine #Neuroscience #Neuroscience of respiration and sleep #Respiratory Support and Mechanisms #Respiratory physiology #Respiratory system

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