Atomistic molecular simulations of protein folding

2012/01/17 by Robert B. Best, Robert B Best · 1 citation
Biochemistry, Genetics and Molecular Biology · Chemistry · Engineering · Materials Science · #Biology #Chemistry #Computational chemistry #Computer science #Context (archaeology) #Energy landscape #Engineering #Enzyme Structure and Function #Folding (DSP implementation) #Mass Spectrometry Techniques and Applications #Molecular dynamics #Physics #Protein Structure and Dynamics #Protein folding #Statistical physics

paper · doi:10.1016/j.sbi.2011.12.001

openalex publication_date 2012/01/17 · crossref created 2012/01/17 · crossref issued 2012/02/01 · crossref published 2012/02/01 · crossref published-print 2012/02/01 · crossref deposited 2021/12/26 · openalex created_date 2025/10/10 · crossref indexed 2026/05/09 · openalex updated_date 2026/07/15

Citations

• Behind the folding funnel diagram
• Heterogeneity Even at the Speed Limit of Folding: Large-scale Molecular Dynamics Study of a Fast-folding Variant of the Villin Headpiece
• Markov models of molecular kinetics: Generation and validation
• Experimental Parameterization of an Energy Function for the Simulation of Unfolded Proteins
• TRANSITIONPATHSAMPLING: Throwing Ropes Over Rough Mountain Passes, in the Dark
• Protein folded states are kinetic hubs
• Scalable molecular dynamics with NAMD
• Everything you wanted to know about Markov State Models but were afraid to ask
• Improved side‐chain torsion potentials for the Amber ff99SB protein force field

Cited by

• Folding@home [wikipedia]