Haiyu Mao

1. GenPIP: In-Memory Acceleration of Genome Analysis via Tight Integration of Basecalling and Read Mapping
   2022/09/18 by Haiyu Mao, Mao, Haiyu, Mohammed Alser +15 · 4 citations
   Biochemistry, Genetics and Molecular Biology · Computer Science · #Algorithms and Data Compression #DNA and Biological Computing #Data Structures and Algorithms (cs.DS) #FOS: Biological sciences #FOS: Computer and information sciences #Genomics (q-bio.GN) #Genomics and Phylogenetic Studies #Hardware Architecture (cs.AR)
2. Swordfish: A Framework for Evaluating Deep Neural Network-based Basecalling using Computation-In-Memory with Non-Ideal Memristors
   2023/10/06 by Taha Shahroodi, Shahroodi, Taha, Gagandeep Singh +15 · 2 citations
   Biochemistry, Genetics and Molecular Biology · Engineering · #Advanced Memory and Neural Computing #CRISPR and Genetic Engineering #Emerging Technologies (cs.ET) #FOS: Biological sciences #FOS: Computer and information sciences #Ferroelectric and Negative Capacitance Devices #Genomics (q-bio.GN) #Hardware Architecture (cs.AR)
3. MegIS: High-Performance, Energy-Efficient, and Low-Cost Metagenomic Analysis with In-Storage Processing
   2024/06/27 by Nika Mansouri Ghiasi, Mohammad Sadrosadati, Ghiasi, Nika Mansouri +21 · 3 citations
   Biochemistry, Genetics and Molecular Biology · #Distributed #FOS: Biological sciences #FOS: Computer and information sciences #Gene expression and cancer classification #Genomics (q-bio.GN) #Hardware Architecture (cs.AR) #Parallel #and Cluster Computing (cs.DC)