Paul D. Thomas
- The Gene Ontology knowledgebase in 2023
2023/03/03 by James P. Balhoff, Seth Carbon, Dustin Ebert +92 · 110 citations
Biochemistry, Genetics and Molecular Biology · Computer Science · #Bioinformatics and Genomic Networks #Biomedical Text Mining and Ontologies #Computational Drug Discovery Methods
- PANTHER: Making genome‐scale phylogenetics accessible to all
2021/10/30 by Paul D. Thomas, Dustin Ebert, Anushya Muruganujan +3 · 80 citations
Biochemistry, Genetics and Molecular Biology · #Genetic diversity and population structure #Genetics, Bioinformatics, and Biomedical Research #Genomics and Phylogenetic Studies
- InterPro in 2022
2022/11/09 by Typhaine Paysan-Lafosse, Typhaine Paysan‐Lafosse, Matthias Blum +36 · 98 citations
Biochemistry, Genetics and Molecular Biology · Materials Science · #Enzyme Structure and Function #Machine Learning in Bioinformatics #Protein Structure and Dynamics
- The InterPro protein families and domains database: 20 years on
2020/10/23 by Matthias Blum, Hsin-Yu Chang, Sara Chuguransky +30 · 69 citations
Biochemistry, Genetics and Molecular Biology · Chemistry · Materials Science · #Advanced Proteomics Techniques and Applications #Enzyme Structure and Function #Genomics and Phylogenetic Studies
- The Gene Ontology resource: enriching a GOld mine
2020/12/03 by Seth Carbon, Eric Douglass, Benjamin M. Good +97 · 41 citations
Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Biomedical Text Mining and Ontologies #Genomics and Phylogenetic Studies
- PANTHER version 16: a revised family classification, tree-based classification tool, enhancer regions and extensive API
2020/10/29 by Huaiyu Mi, Dustin Ebert, Anushya Muruganujan +4 · 15 citations
Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Genomics and Phylogenetic Studies #Machine Learning in Bioinformatics
- Quest for Orthologs in the era of Data Deluge and AI: Challenges and Innovations in Orthology Prediction and Data Integration
2025/10/14 by Sina Majidian, Armin Hadziahmetovic, Felix Langschied +27 · 2 voices · 2 citations
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Environmental DNA in Biodiversity Studies #Genomics and Phylogenetic Studies #Microbial Community Ecology and Physiology