Bialek, William

1. The information bottleneck method
   2000/04/24 by Naftali Tishby, Tishby, Naftali, Fernando C. N. Pereira +4 · 341 citations
   Computer Science · Decision Sciences · Engineering · Physics and Astronomy · #Advanced Bandit Algorithms Research #Error Correcting Code Techniques #Wireless Communication Security Techniques #cond-mat.dis-nn #cs.LG #nlin.AO #physics.data-an
2. Predictive information in a sensory population
   2013/06/30 by Palmer, Stephanie E., Marre, Olivier, Berry, Michael J. +1 · 8 citations
   #FOS: Biological sciences #Neurons and Cognition (q-bio.NC)
3. Exactly solvable statistical physics models for large neuronal populations
   2023/10/16 by Christopher W. Lynn, Qiwei Yu, Lynn, Christopher W. +7 · 1 voice · 2 citations
   Biochemistry, Genetics and Molecular Biology · Computer Science · Neuroscience · #Gene Regulatory Network Analysis #Neural Networks and Applications #Neural dynamics and brain function #cond-mat.dis-nn #cond-mat.stat-mech #physics.bio-ph #q-bio.NC
4. Mapping the stereotyped behaviour of freely-moving fruit flies
   2013/10/16 by Gordon J Berman, Berman, Gordon J., Daniel M. Choi +5 · 7 citations
   Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Neuroscience · #Biological Physics (physics.bio-ph) #Computer Vision and Pattern Recognition (cs.CV) #FOS: Biological sciences #FOS: Computer and information sciences #FOS: Physical sciences #Insect and Arachnid Ecology and Behavior #Machine Learning (stat.ML) #Neurobiology and Insect Physiology Research #Plant and animal studies #Quantitative Methods (q-bio.QM)
5. Entropy and Information in Neural Spike Trains
   1996/03/18 by Strong, S. P., Koberle, Roland, van Steveninck, Rob R. de Ruyter +1 · 4 citations
   #Condensed Matter (cond-mat) #FOS: Biological sciences #FOS: Physical sciences #Neurons and Cognition (q-bio.NC)
6. Information processing in living systems
   2014/12/30 by Tkačik, Gašper, Bialek, William · 4 citations
   #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Quantitative Methods (q-bio.QM) #Statistical Mechanics (cond-mat.stat-mech)
7. Efficient representation as a design principle for neural coding and computation
   2007/12/28 by Bialek, William, van Steveninck, Rob R. de Ruyter, Tishby, Naftali · 3 citations
   #FOS: Biological sciences #Neurons and Cognition (q-bio.NC)
8. Positional information, in bits
   2011/12/30 by Julien Dubuis, Gašper Tkačik, Dubuis, Julien O. +7 · 3 citations
   Biochemistry, Genetics and Molecular Biology · #Developmental Biology and Gene Regulation #FOS: Biological sciences #Gene Regulatory Network Analysis #Genomics and Chromatin Dynamics #Molecular Networks (q-bio.MN)
9. Direct estimates of irreversibility from time series
   2024/12/27 by Trevor GrandPre, Gianluca Teza, GrandPre, Trevor +3 · 2 voices · 3 citations
   #cond-mat.stat-mech #physics.bio-ph #q-bio.NC #stat.AP
10. Deriving a genetic regulatory network from an optimization principle
    2023/02/11 by Thomas R. Sokolowski, Sokolowski, Thomas R, Thomas Gregor +5 · 6 citations
    Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Gene Regulatory Network Analysis #Genomics and Chromatin Dynamics #Molecular Networks (q-bio.MN)
11. Stability and noise in biochemical switches
    2000/05/15 by William Bialek, Bialek, William · 2 citations
    Biochemistry, Genetics and Molecular Biology · Physics and Astronomy · #Adaptation and Self-Organizing Systems (nlin.AO) #Biological Physics (physics.bio-ph) #Disordered Systems and Neural Networks (cond-mat.dis-nn) #FOS: Biological sciences #FOS: Physical sciences #Molecular Networks (q-bio.MN) #Soft Condensed Matter (cond-mat.soft) #cond-mat.dis-nn #cond-mat.soft #nlin.AO #physics.bio-ph #q-bio.MN
12. Rediscovering the power of pairwise interactions
    2007/12/28 by Bialek, William, Ranganathan, Rama · 2 citations
    #FOS: Biological sciences #Quantitative Methods (q-bio.QM)
13. Spin glass models for a network of real neurons
    2009/12/30 by Tkacik, Gasper, Schneidman, Elad, Berry, Michael J. +1 · 2 citations
    #FOS: Biological sciences #Neurons and Cognition (q-bio.NC)
14. Estimating mutual information and multi--information in large networks
    2005/02/03 by Noam Slonim, Gurinder S. Atwal, Slonim, Noam +5 · 2 citations
    Physics and Astronomy · #Artificial Intelligence (cs.AI) #Complex Network Analysis Techniques #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Information Theory (cs.IT) #Machine Learning (cs.LG) #Opinion Dynamics and Social Influence
15. Exploring a strongly non-Markovian animal behavior
    2020/12/31 by Alba, Vasyl, Berman, Gordon J., Bialek, William +1 · 2 citations
    #FOS: Biological sciences #FOS: Physical sciences #Neurons and Cognition (q-bio.NC) #Statistical Mechanics (cond-mat.stat-mech)
16. Predictive Information
    1999/02/25 by William Bialek, Naftali Tishby, Bialek, William +1 · 1 citation
    Biochemistry, Genetics and Molecular Biology · Physics and Astronomy · #Disordered Systems and Neural Networks (cond-mat.dis-nn) #FOS: Biological sciences #FOS: Physical sciences #Neurons and Cognition (q-bio.NC) #Statistical Mechanics (cond-mat.stat-mech) #cond-mat.dis-nn #cond-mat.stat-mech #q-bio.NC
17. Thinking about the brain
    2002/05/10 by William Bialek, Bialek, William · 1 citation
    Biochemistry, Genetics and Molecular Biology · Computer Science · Neuroscience · Physics and Astronomy · #Adaptation and Self-Organizing Systems (nlin.AO) #Biological Physics (physics.bio-ph) #Cognitive Science and Education Research #Disordered Systems and Neural Networks (cond-mat.dis-nn) #FOS: Biological sciences #FOS: Physical sciences #Fractal and DNA sequence analysis #Neural Networks and Applications #Neurons and Cognition (q-bio.NC) #cond-mat.dis-nn #nlin.AO #physics.bio-ph #q-bio.NC
18. Cooperativity, sensitivity and noise in biochemical signaling
    2005/12/31 by Bialek, William, Setayeshgar, Sima · 1 citation
    #FOS: Biological sciences #Molecular Networks (q-bio.MN) #Subcellular Processes (q-bio.SC)
19. Ising models for networks of real neurons
    2006/11/22 by Tkacik, Gasper, Schneidman, Elad, Berry, Michael J +1 · 1 citation
    #Disordered Systems and Neural Networks (cond-mat.dis-nn) #FOS: Biological sciences #FOS: Physical sciences #Neurons and Cognition (q-bio.NC)
20. Statistical mechanics for networks of real neurons
    2024/08/31 by Leenoy Meshulam, Meshulam, Leenoy, William Bialek +1 · 3 citations
    Computer Science · Neuroscience · #Disordered Systems and Neural Networks (cond-mat.dis-nn) #FOS: Biological sciences #FOS: Physical sciences #Neural Networks and Applications #Neural dynamics and brain function #Neurons and Cognition (q-bio.NC)
21. Synergy from Silence in a Combinatorial Neural Code
    2006/07/13 by Elad Schneidman, Jason Puchalla, Schneidman, Elad +9 · 1 citation
    Computer Science · Engineering · Neuroscience · #Advanced Memory and Neural Computing #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Molecular Networks (q-bio.MN) #Neural Networks and Applications #Neural dynamics and brain function #Neurons and Cognition (q-bio.NC)
22. Coarse--graining and hints of scaling in a population of 1000+ neurons
    2018/12/31 by Meshulam, Leenoy, Gauthier, Jeffrey L., Brody, Carlos D. +2 · 1 citation
    #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Neurons and Cognition (q-bio.NC)
23. When are correlations strong?
    2010/12/29 by Feraz Azhar, Azhar, Feraz, William Bialek +1 · 1 citation
    Computer Science · Neuroscience · #Data Analysis #Disordered Systems and Neural Networks (cond-mat.dis-nn) #FOS: Biological sciences #FOS: Physical sciences #Functional Brain Connectivity Studies #Neural Networks and Applications #Neural dynamics and brain function #Neurons and Cognition (q-bio.NC) #Statistical Mechanics (cond-mat.stat-mech) #Statistics and Probability (physics.data-an)
24. Information and fitness
    2007/12/28 by Samuel F. Taylor, Naftali Tishby, Taylor, Samuel F. +3 · 1 citation
    Biochemistry, Genetics and Molecular Biology · Social Sciences · #Evolution and Genetic Dynamics #Evolutionary Game Theory and Cooperation #FOS: Biological sciences #Gene Regulatory Network Analysis #Populations and Evolution (q-bio.PE)
25. Exact minimax entropy models of large-scale neuronal activity
    2023/12/18 by Christopher W. Lynn, Qiwei Yu, Lynn, Christopher W. +7 · 2 citations
    Computer Science · Neuroscience · #Biological Physics (physics.bio-ph) #Disordered Systems and Neural Networks (cond-mat.dis-nn) #FOS: Biological sciences #FOS: Physical sciences #Neural Networks and Applications #Neural dynamics and brain function #Neurons and Cognition (q-bio.NC) #Statistical Mechanics (cond-mat.stat-mech)
26. Searching for long time scales without fine tuning
    2020/08/26 by Chen, Xiaowen, Bialek, William · 1 citation
    #Adaptation and Self-Organizing Systems (nlin.AO) #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Neurons and Cognition (q-bio.NC)
27. How different are self and nonself?
    2022/12/22 by Mayer, Andreas, Levine, Jonathan A., Russo, Christopher J. +3 · 1 citation
    #Cell Behavior (q-bio.CB) #FOS: Biological sciences
28. Features and dimensions: Motion estimation in fly vision
    2005/05/02 by William Bialek, Bialek, William, Rob R. de Ruyter van Steveninck +1 · 1 citation
    Biochemistry, Genetics and Molecular Biology · Neuroscience · #FOS: Biological sciences #Neural dynamics and brain function #Neurobiology and Insect Physiology Research #Neurons and Cognition (q-bio.NC) #Visual perception and processing mechanisms #q-bio.NC
29. Maximum entropy models for patterns of gene expression
    2024/08/15 by C Sarra, Sarra, Camilla, Leopoldo Sarra +11 · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Gene Regulatory Network Analysis #Molecular Networks (q-bio.MN) #Statistical Mechanics (cond-mat.stat-mech)