Gašper Tkačik
- Optimal Decoding of Cellular Identities in a Genetic Network
2019/01/31 by Mariela D. Petkova, Gašper Tkačik, William Bialek +3 · 1 voice · 5 citations
Biochemistry, Genetics and Molecular Biology · #DNA and Biological Computing #Fractal and DNA sequence analysis #Gene Regulatory Network Analysis
- Deriving a genetic regulatory network from an optimization principle
2023/02/11 by Thomas R. Sokolowski, Thomas Gregor, Sokolowski, Thomas R +5 · 4 citations
Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Gene Regulatory Network Analysis #Genomics and Chromatin Dynamics #Molecular Networks (q-bio.MN)
- Information content and optimization of self-organized developmental systems
2023/12/10 by David B. Brückner, Brückner, David B., Gašper Tkačik +1 · 5 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Engineering · #Adaptation and Self-Organizing Systems (nlin.AO) #Biological Physics (physics.bio-ph) #Cell Image Analysis Techniques #Cephalopods and Marine Biology #FOS: Biological sciences #FOS: Physical sciences #Modular Robots and Swarm Intelligence #Pattern Formation and Solitons (nlin.PS) #Statistical Mechanics (cond-mat.stat-mech) #Tissues and Organs (q-bio.TO)
- Decoding of position in the developing neural tube from antiparallel morphogen gradients
2017/06/30 by Marcin Zagórski, Yoji Tabata, Nathalie Brandenberg +5 · 1 voice · 2 citations
Biochemistry, Genetics and Molecular Biology · #Developmental Biology and Gene Regulation #Genomics and Chromatin Dynamics #RNA Research and Splicing
- Positional information, in bits
2013/10/02 by Julien Dubuis, Gašper Tkačik, Eric Wieschaus +2 · 1 voice · 2 citations
Biochemistry, Genetics and Molecular Biology · Neuroscience · #Cell Image Analysis Techniques #Gene Regulatory Network Analysis #Neurobiology and Insect Physiology Research
- The many bits of positional information
2021/01/15 by Gašper Tkačik, Thomas Gregor · 1 voice · 2 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Cell Image Analysis Techniques #Gene Regulatory Network Analysis #Plant and Biological Electrophysiology Studies
- Positional information, positional error, and read-out precision in\n morphogenesis: a mathematical framework
2014/04/22 by Gašper Tkačik, Julien Dubuis, Tkačik, Gašper +5 · 1 citation
Biochemistry, Genetics and Molecular Biology · #Gene Regulatory Network Analysis #Single-cell and spatial transcriptomics #Gene expression and cancer classification
- Eukaryotic gene regulation at equilibrium, or non?
2021/10/13 by Benjamin Zoller, Zoller, Benjamin, Thomas Gregor +3 · 1 citation
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Bacterial Genetics and Biotechnology #Bacteriophages and microbial interactions #FOS: Biological sciences #Molecular Networks (q-bio.MN) #Populations and Evolution (q-bio.PE) #RNA and protein synthesis mechanisms
- Marr's three levels for embryonic development: information, dynamical systems, gene networks
2025/10/28 by David B. Brückner, Brückner, David B., Gašper Tkačik +1 · 1 voice · 1 citation
#physics.bio-ph