John T. McCrone
- A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology
2020/07/15 by Andrew Rambaut, Edward C. Holmes, Áine O’Toole +5 · 60 citations
Biochemistry, Genetics and Molecular Biology · Medicine · #Genomics and Phylogenetic Studies #SARS-CoV-2 and COVID-19 Research #vaccines and immunoinformatics approaches
- Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool
2021/07/05 by Áine O’Toole, Emily Scher, Anthony Underwood +16 · 24 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Environmental Science · #Bacteriophages and microbial interactions #Genomics and Phylogenetic Studies #Plant Virus Research Studies
- BEAST X for Bayesian phylogenetic, phylogeographic and phylodynamic inference
2025/07/07 by Guy Baele, Xiang Ji, Gabriel W. Hassler +8 · 2 voices · 49 citations
Earth and Planetary Sciences · Biochemistry, Genetics and Molecular Biology · #Evolution and Paleontology Studies #Genomics and Phylogenetic Studies #Genetic diversity and population structure
- Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity
2020/11/18 by Erik Volz, Verity Hill, John T. McCrone +95 · 4 citations
Medicine · Mathematics · #SARS-CoV-2 and COVID-19 Research #COVID-19 Clinical Research Studies #COVID-19 epidemiological studies
- Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England
2021/03/25 by Erik Volz, Swapnil Mishra, Meera Chand +35 · 5 citations
Medicine · #SARS-CoV-2 and COVID-19 Research #SARS-CoV-2 detection and testing #Viral gastroenteritis research and epidemiology
- HIPSTR: highest independent posterior subtree reconstruction in TreeAnnotator X
2025/09/06 by Guy Baele, Luiz Max Carvalho, Marius Brusselmans +6 · 1 voice · 3 citations
Biochemistry, Genetics and Molecular Biology · Earth and Planetary Sciences · Environmental Science · #Evolution and Paleontology Studies #Genomics and Phylogenetic Studies #Species Distribution and Climate Change
- Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil
2021/04/14 by Nuno R. Faria, Thomas A. Mellan, Charles Whittaker +69 · 3 citations
Medicine · #SARS-CoV-2 and COVID-19 Research #Viral Infections and Outbreaks Research #COVID-19 Clinical Research Studies
- Addendum: A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology
2021/01/29 by Andrew Rambaut, Edward C. Holmes, Áine O’Toole +5 · 1 citation
Biochemistry, Genetics and Molecular Biology · Medicine · #Genomics and Phylogenetic Studies #Machine Learning in Bioinformatics #SARS-CoV-2 and COVID-19 Research