Nikos C. Kyrpides
- CheckV assesses the quality and completeness of metagenome-assembled viral genomes
2020/12/21 by Stephen Nayfach, Antônio Pedro Camargo, Frederik Schulz +3 · 73 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Environmental Science · #Bacteriophages and microbial interactions #Genomics and Phylogenetic Studies #Plant Virus Research Studies
- Identification of mobile genetic elements with geNomad
2023/09/21 by Antônio Pedro Camargo, Simon Roux, Frederik Schulz +6 · 1 voice · 51 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Environmental Science · #Bacteriophages and microbial interactions #Genomics and Phylogenetic Studies #Plant Virus Research Studies
- A unified catalog of 204,938 reference genomes from the human gut microbiome
2020/07/20 by Alexandre Almeida, Stephen Nayfach, Miguel Boland +10 · 44 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Medicine · #Clostridium difficile and Clostridium perfringens research #Gut microbiota and health #Probiotics and Fermented Foods
- The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
1997/11/27 by Hans-Peter Klenk, Rebecca A. Clayton, Jean-Francois Tomb +60 · 20 citations
Biochemistry, Genetics and Molecular Biology · Materials Science · #Bacterial Genetics and Biotechnology #Enzyme Structure and Function #Genomics and Phylogenetic Studies
- The emergence of major cellular processes in evolution
1996/07/22 by Christos Ouzounis, Nikos C. Kyrpides · 2 citations
Biochemistry, Genetics and Molecular Biology · Physics and Astronomy · #Abiogenesis #Ancestor #Archaea #Biology #Computational biology #Evolutionary biology #Extant taxon #Gene #Genetics #Genome #Genome evolution #Genomics and Phylogenetic Studies #Most recent common ancestor #Origins and Evolution of Life #Phylogenetic tree #Phylogenetics #RNA and protein synthesis mechanisms #Three-domain system
- Planetary-scale metagenomic search reveals new patterns of CRISPR targeting
2025/06/12 by Simon Roux, Uri Neri, Brian Bushnell +9 · 1 voice · 7 citations
Biochemistry, Genetics and Molecular Biology · Environmental Science · Agricultural and Biological Sciences · #CRISPR and Genetic Engineering #Bacteriophages and microbial interactions #Insect symbiosis and bacterial influences
- Metagenomic Analysis of Microbial Symbionts in a Gutless Worm
2006/09/17 by Tanja Woyke, Hanno Teeling, Natalia Ivanova +15 · 2 citations
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Environmental DNA in Biodiversity Studies #Genomics and Phylogenetic Studies #Microbial Community Ecology and Physiology #Protist diversity and phylogeny
- Genome sequence of the Fleming strain of Micrococcus luteus, a simple free-living actinobacterium.
2009/12/01 by Michael Young, Vladislav Artsatbanov, Harry R. Beller +30 · 1 citation
Biochemistry, Genetics and Molecular Biology · Environmental Science · Medicine · #Actinomycetales infections and treatment #Genomics and Phylogenetic Studies #Microbial Community Ecology and Physiology #Microbial Natural Products and Biosynthesis #Mycobacterium research and diagnosis
- Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels
2015/06/02 by Elsa Petit, Maddalena V. Coppi, James Cm Hayes +17 · 1 citation
Engineering · Biochemistry, Genetics and Molecular Biology · #Biofuel production and bioconversion #Microbial Metabolic Engineering and Bioproduction #Anaerobic Digestion and Biogas Production
- Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
2014/03/15 by Bryndan P. Durham, Jana Grote, Kerry Whittaker +24 · 1 citation
Environmental Science · Biochemistry, Genetics and Molecular Biology · #Microbial Community Ecology and Physiology #Genomics and Phylogenetic Studies #Protist diversity and phylogeny
- Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1T)
2010/08/20 by Markus Göker, Brittany Held, Alla Lapidus +34 · 1 citation
Biochemistry, Genetics and Molecular Biology · Environmental Science · Agricultural and Biological Sciences · #Genomics and Phylogenetic Studies #Microbial Community Ecology and Physiology #Probiotics and Fermented Foods