Wu, Fang
- LocAgent: Graph-Guided LLM Agents for Code Localization
2025/03/12 by Zhaoling Chen, Xiangru Tang, Chen, Zhaoling +15 · 32 citations
Computer Science · #Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #FOS: Computer and information sciences #Natural Language Processing Techniques #Software Engineering (cs.SE) #Text Readability and Simplification #Web Application Security Vulnerabilities
- Molformer: Motif-based Transformer on 3D Heterogeneous Molecular Graphs
2021/10/04 by Fang Wu, Dragomir Radev, Wu, Fang +2 · 7 citations
Materials Science · Computer Science · Biochemistry, Genetics and Molecular Biology · #Machine Learning in Materials Science #Computational Drug Discovery Methods #Protein Structure and Dynamics
- The Invisible Leash: Why RLVR May or May Not Escape Its Origin
2025/07/20 by Wu, Fang, Xuan, Weihao, Lu, Ximing +4 · 45 citations
#Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #FOS: Computer and information sciences #Machine Learning (cs.LG)
- A Survey of Generative AI for de novo Drug Design: New Frontiers in Molecule and Protein Generation
2024/02/13 by Tang, Xiangru, Dai, Howard, Knight, Elizabeth +4 · 7 citations
#Artificial Intelligence (cs.AI) #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG)
- Agent KB: Leveraging Cross-Domain Experience for Agentic Problem Solving
2025/07/08 by Xiangru Tang, Tang, Xiangru, Tianrui Qin +31 · 22 citations
Computer Science · #Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #FOS: Computer and information sciences #Multi-Agent Systems and Negotiation #Reinforcement Learning in Robotics
- SemiReward: A General Reward Model for Semi-supervised Learning
2023/10/04 by Siyuan Li, Li, Siyuan, Weiyang Jin +11 · 4 citations
Mathematics · #Advanced Statistical Methods and Models #Artificial Intelligence (cs.AI) #FOS: Computer and information sciences #Machine Learning (cs.LG)
- MedAgentsBench: Benchmarking Thinking Models and Agent Frameworks for Complex Medical Reasoning
2025/03/10 by Tang, Xiangru, Shao, Daniel, Sohn, Jiwoong +9 · 10 citations
#Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #FOS: Computer and information sciences
- Integration of Pre-trained Protein Language Models into Geometric Deep Learning Networks
2022/12/07 by Fang Wu, Wu, Fang, Wu, Lirong +5 · 3 citations
Biochemistry, Genetics and Molecular Biology · #Biochemical and Structural Characterization #Computational Engineering #FOS: Biological sciences #FOS: Computer and information sciences #Finance #Machine Learning (cs.LG) #Machine Learning in Bioinformatics #Protein Structure and Dynamics #Quantitative Methods (q-bio.QM) #and Science (cs.CE)
- DiffMD: A Geometric Diffusion Model for Molecular Dynamics Simulations
2022/04/19 by Fang Wu, Stan Z. Li, Wu, Fang +1 · 2 citations
Biochemistry, Genetics and Molecular Biology · Chemistry · Materials Science · #Advanced NMR Techniques and Applications #Computational Engineering #FOS: Computer and information sciences #Finance #Machine Learning (cs.LG) #Machine Learning in Materials Science #Protein Structure and Dynamics #and Science (cs.CE)
- Architecture-Agnostic Masked Image Modeling -- From ViT back to CNN
2022/05/27 by Li, Siyuan, Wu, Di, Wu, Fang +2 · 2 citations
#Artificial Intelligence (cs.AI) #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences
- Social networks that matter: Twitter under the microscope
2008/12/04 by Bernardo A. Huberman, Huberman, Bernardo A., Daniel M. Romero +3 · 1 citation
Social Sciences · Physics and Astronomy · #Social Media and Politics #Opinion Dynamics and Social Influence #Complex Network Analysis Techniques
- VeriGUI: Verifiable Long-Chain GUI Dataset
2025/08/06 by Liu, Shunyu, Liu, Minghao, Zhou, Huichi +29 · 7 citations
#FOS: Computer and information sciences #Human-Computer Interaction (cs.HC)
- Collision-aware Task Assignment for Multi-Robot Systems
2019/04/08 by Fang Wu, Wu, Fang, Vivek Shankar Varadharajan +3 · 1 citation
Computer Science · #FOS: Computer and information sciences #Optimization and Search Problems #Reinforcement Learning in Robotics #Robotic Path Planning Algorithms #Robotics (cs.RO)
- Large Language Models are Good Relational Learners
2025/06/06 by Wu, Fang, Dwivedi, Vijay Prakash, Leskovec, Jure · 6 citations
#Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #FOS: Computer and information sciences #Machine Learning (cs.LG)
- A Hierarchical Training Paradigm for Antibody Structure-sequence Co-design
2023/10/30 by Fang Wu, Wu, Fang, Stan Z. Li +1 · 2 citations
Medicine · Biochemistry, Genetics and Molecular Biology · #Monoclonal and Polyclonal Antibodies Research #vaccines and immunoinformatics approaches #Protein purification and stability
- PoseX: AI Defeats Physics Approaches on Protein-Ligand Cross Docking
2025/05/03 by Jiang, Yize, Li, Xinze, Zhang, Yuanyuan +13 · 3 citations
#FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Quantitative Methods (q-bio.QM)
- Improving Molecular Representation Learning with Metric Learning-enhanced Optimal Transport
2022/02/13 by Wu, Fang, Courty, Nicolas, Jin, Shuting +1 · 1 citation
#Artificial Intelligence (cs.AI) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Quantitative Methods (q-bio.QM)
- Discovering the Representation Bottleneck of Graph Neural Networks
2022/05/15 by Fang Wu, Siyuan Li, Wu, Fang +5 · 1 citation
Computer Science · #Advanced Graph Neural Networks #Artificial Intelligence (cs.AI) #FOS: Computer and information sciences #Machine Learning (cs.LG) #Online Learning and Analytics
- Rethinking Explaining Graph Neural Networks via Non-parametric Subgraph Matching
2023/01/07 by Wu, Fang, Li, Siyuan, Jin, Xurui +4 · 1 citation
#Artificial Intelligence (cs.AI) #FOS: Computer and information sciences #Machine Learning (cs.LG)
- Instructor-inspired Machine Learning for Robust Molecular Property Prediction
2023/04/08 by Fang Wu, Shuting Jin, Wu, Fang +7 · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · Materials Science · #Artificial Intelligence (cs.AI) #Computational Drug Discovery Methods #Computational Engineering #FOS: Computer and information sciences #Finance #Machine Learning (cs.LG) #Machine Learning in Bioinformatics #Machine Learning in Materials Science #and Science (cs.CE)
- Retrieval-Reasoning Large Language Model-based Synthetic Clinical Trial Generation
2024/10/16 by Xu, Zerui, Wu, Fang, Zhang, Yuanyuan +1 · 2 citations
#Computation and Language (cs.CL) #FOS: Computer and information sciences #Machine Learning (cs.LG)
- Trading-R1: Financial Trading with LLM Reasoning via Reinforcement Learning
2025/09/14 by Edward W. Sun, Xiao, Yijia, Sun, Edward +8 · 4 citations
Decision Sciences · Economics, Econometrics and Finance · #Artificial Intelligence (cs.AI) #Auction Theory and Applications #Computation and Language (cs.CL) #Computational Engineering #FOS: Computer and information sciences #FOS: Economics and business #Finance #Financial Markets and Investment Strategies #Machine Learning (cs.LG) #Stock Market Forecasting Methods #Trading and Market Microstructure (q-fin.TR) #and Science (cs.CE)
- CellForge: Agentic Design of Virtual Cell Models
2025/08/04 by Xiangru Tang, Z. Q. Yu, Tang, Xiangru +25 · 3 citations
Biochemistry, Genetics and Molecular Biology · #Artificial Intelligence (cs.AI) #Cell Image Analysis Techniques #Computation and Language (cs.CL) #FOS: Biological sciences #FOS: Computer and information sciences #Gene Regulatory Network Analysis #Machine Learning (cs.LG) #Quantitative Methods (q-bio.QM) #Single-cell and spatial transcriptomics
- When to Trust Context: Self-Reflective Debates for Context Reliability
2025/06/06 by Zhou, Zeqi, Fang‐Xiang Wu, Shayan Talaei +12 · 2 citations
Computer Science · Social Sciences · #Adversarial Robustness in Machine Learning #Artificial Intelligence (cs.AI) #Computation and Language (cs.CL) #Ethics and Social Impacts of AI #Explainable Artificial Intelligence (XAI) #FOS: Computer and information sciences
- Agent0: Unleashing Self-Evolving Agents from Zero Data via Tool-Integrated Reasoning
2025/11/20 by Xia, Peng, Zeng, Kaide, Jiaqi Liu +10 · 3 citations
Computer Science · #Multimodal Machine Learning Applications #Topic Modeling #Reinforcement Learning in Robotics
- Predicting mutational effects on protein binding from folding energy
2025/07/07 by Arthur Deng, Deng, Arthur, Karsten D. Householder +9 · 1 citation
Biochemistry, Genetics and Molecular Biology · Materials Science · #Biomolecules (q-bio.BM) #FOS: Biological sciences #FOS: Computer and information sciences #Machine Learning (cs.LG) #Machine Learning in Bioinformatics #Machine Learning in Materials Science #Protein Structure and Dynamics