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Arc diagrams: visualizing structure in strings

2003/06/26 by Martin Wattenberg · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · Mathematics · #Fractal and DNA sequence analysis #Algorithms and Data Compression #Machine Learning in Bioinformatics #Computer science #Visualization #Arc (geometry) #Diagram #String (physics) #Data visualization #Subsequence #Data structure #Representation (politics) #Theoretical computer science #Programming language #Algorithm #Data mining #Database #Geometry #Mathematics

paper · doi:10.1109/infvis.2002.1173155

openalex publication_date 2003/06/26 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/29

Abstract

This paper introduces a new visualization method, the arc diagram, which is capable of representing complex patterns of repetition in string data. Arc diagrams improve over previous methods such as dotplots because they scale efficiently for strings that contain many instances of the same subsequence. This paper describes design and implementation issues related to arc diagrams and shows how they may be applied to visualize such diverse data as music, text, and compiled code.

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