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The fitness challenge of studying molecular adaptation

2019/10/23 by David Coombes, James Moir, Anthony M. Poole +2 · 1 citation
Biochemistry, Genetics and Molecular Biology · #Evolution and Genetic Dynamics #CRISPR and Genetic Engineering #Gene Regulatory Network Analysis

paper · doi:10.1042/bst20180626

openalex publication_date 2019/10/23 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/23

Abstract

Advances in bioinformatics and high-throughput genetic analysis increasingly allow us to predict the genetic basis of adaptive traits. These predictions can be tested and confirmed, but the molecular-level changes - i.e. the molecular adaptation - that link genetic differences to organism fitness remain generally unknown. In recent years, a series of studies have started to unpick the mechanisms of adaptation at the molecular level. In particular, this work has examined how changes in protein function, activity, and regulation cause improved organismal fitness. Key to addressing molecular adaptations is identifying systems and designing experiments that integrate changes in the genome, protein chemistry (molecular phenotype), and fitness. Knowledge of the molecular changes underpinning adaptations allow new insight into the constraints on, and repeatability of adaptations, and of the basis of non-additive interactions between adaptive mutations. Here we critically discuss a series of studies that examine the molecular-level adaptations that connect genetic changes and fitness.

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