Recent advances in predicting and modeling protein–protein interactions

2023/04/14 by Jesse Durham, Jing Zhang, Ian R. Humphreys +2 · 1 voice · 5 citations
Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Microbial Metabolic Engineering and Bioproduction #Protein Structure and Dynamics

paper · doi:10.1016/j.tibs.2023.03.003

openalex publication_date 2023/04/14 · crossref created 2023/04/14 · crossref issued 2023/06/01 · crossref published 2023/06/01 · crossref published-print 2023/06/01 · openalex created_date 2025/10/10 · crossref deposited 2025/10/18 · crossref indexed 2026/07/24 · openalex updated_date 2026/07/28

Citations

• Improved protein structure prediction using predicted interresidue orientations
• Improved protein structure prediction using potentials from deep learning
• The <scp>BioGRID</scp> database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions
• Highly accurate protein structure prediction with AlphaFold
• Highly accurate protein structure prediction for the human proteome
• Accurate prediction of protein structures and interactions using a three-track neural network
• ColabFold: making protein folding accessible to all

Cited by

• PTMs as molecular encoders: reprogramming chaperones into epichaperomes for network control in disease
• Computing the Human Interactome
• Meta-analysis of microarray data to identify potential signature genes and MiRNAs associated with the pathogenesis of asthma
• <scp>CASP16</scp> Protein Monomer Structure Prediction Assessment
• Matching mitochondrial respiration to changing environments through acclimatization and the evolution of fixed genetic differences

Discussions

• Really nice review and useful resource "Recent advances in predicting and modeling protein–protein interactions" (2023) doi.org/10.1016/j.ti... [bsky, 5 points, 0 comments]