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A Colour-Encoded Nanometric Ruler for Axial Super-Resolution Microscopies

2023/11/01 by Ilya Olevsko, Olevsko, Ilya, Omer Shavit +9 · 1 citation
Biochemistry, Genetics and Molecular Biology · Engineering · #Advanced Fluorescence Microscopy Techniques #FOS: Biological sciences #FOS: Physical sciences #Near-Field Optical Microscopy #Optics (physics.optics) #Photonic and Optical Devices #Quantitative Methods (q-bio.QM) #Subcellular Processes (q-bio.SC)

paper · pdf · doi:10.48550/arxiv.2311.00590

openalex publication_date 2023/11/01 · openalex created_date 2023/11/03 · openalex updated_date 2026/07/28

Abstract

Recent progress has boosted the resolving power of optical microscopies to spatial dimensions well below the diffraction limit. Yet, axial super-resolution and axial single-molecule localisation typically require more complicated implementations than their lateral counterparts. In the present work, we propose a simple solution for axial metrology by providing a multi-layered single-excitation, dual-emission test slide, in which axial distance is colour-encoded. Our test slide combines on a standard microscope coverslip substrate two flat, thin, uniform and brightly emitting fluorophore layers, separated by a nanometric transparent spacer layer having a refractive index close to a biological cell. The ensemble is sealed in an index-matched protective polymer. As a proof-of-principle, we estimate the light confinement resulting from evanescent-wave excitation in total internal reflection fluorescence (TIRF) microscopy. Our test sample permits, even for the non-expert user, a facile axial metrology at the sub-100-nm scale, a critical requirement for axial super-resolution, as well as near-surface imaging, spectroscopy and sensing.

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