Anne E. Carpenter
- CellProfiler 4: improvements in speed, utility and usability
2021/09/10 by David R. Stirling, Madison J. Swain-Bowden, Alice Lucas +3 · 79 citations
Biochemistry, Genetics and Molecular Biology · #Advanced Fluorescence Microscopy Techniques #Cell Image Analysis Techniques #Single-cell and spatial transcriptomics
- Long-Range Directional Movement of an Interphase Chromosome Site
2006/04/01 by Chien-Hui Chuang, Anne E. Carpenter, Beata Fuchsova +4 · 12 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Chromosomal and Genetic Variations #DNA and Nucleic Acid Chemistry #Genomics and Chromatin Dynamics
- Pipeline for illumination correction of images for high‐throughput microscopy
2014/09/16 by S. SINGH, Shantanu Singh, M.‐A. BRAY +5 · 27 citations
Biochemistry, Genetics and Molecular Biology · #Advanced Electron Microscopy Techniques and Applications #Advanced Fluorescence Microscopy Techniques #Artificial intelligence #Cell Image Analysis Techniques #Computer science #Computer vision #Data mining #Image (mathematics) #Image quality #Noise (video) #Pattern recognition (psychology) #Pipeline (software) #Software #Throughput
- Applying Faster R-CNN for Object Detection on Malaria Images
2018/04/25 by Jane Hung, Hung, Jane, Deepali Ravel +25 · 3 citations
Computer Science · #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #cs.CV
- Learning Molecular Representation in a Cell
2024/06/17 by Gang Liu, Liu, Gang, Srijit Seal +11 · 5 citations
Computer Science · Biochemistry, Genetics and Molecular Biology · Materials Science · #Computational Drug Discovery Methods #Cell Image Analysis Techniques #Machine Learning in Materials Science
- A Decade in a Systematic Review: The Evolution and Impact of Cell Painting
2024/05/04 by Srijit Seal, Maria‐Anna Trapotsi, Seal, Srijit +13 · 2 citations
Arts and Humanities · #Art, Politics, and Modernism #Cell Behavior (q-bio.CB) #FOS: Biological sciences #Fashion and Cultural Textiles #Subcellular Processes (q-bio.SC) #Visual Culture and Art Theory
- MOTIVE: A Drug-Target Interaction Graph For Inductive Link Prediction
2024/06/12 by John Arévalo, Ellen Su, Arevalo, John +5 · 2 citations
Computer Science · Mathematics · Medicine · #Combinatorics #Computational Drug Discovery Methods #Computer science #Drug #FOS: Computer and information sciences #Graph #Link (geometry) #Machine Learning (cs.LG) #Mathematics #Medicine #Pharmacology #Theoretical computer science
- Capturing cell heterogeneity in representations of cell populations for image-based profiling using contrastive learning
2024/11/11 by Robert van Dijk, John Arévalo, Mehrtash Babadi +2 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · Engineering · #Cell Image Analysis Techniques #Image Processing Techniques and Applications #3D Printing in Biomedical Research
- Pervasive mislocalization of pathogenic coding variants underlying human disorders
2024/09/30 by Jessica Lacoste, Marzieh Haghighi, Shahan Haider +31 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · #Biomedical Text Mining and Ontologies #Genomic variations and chromosomal abnormalities #Genomics and Rare Diseases
- Visualization of image data from cells to organisms
2010/03/01 by Thomas Walter, David W Shattuck, David W. Shattuck +18 · 1 citation
Biochemistry, Genetics and Molecular Biology · #Advanced Fluorescence Microscopy Techniques #Cell Image Analysis Techniques #Single-cell and spatial transcriptomics
- Reproducible image-based profiling with Pycytominer
2023/11/22 by Erik Serrano, Serrano, Erik, Srinivas Niranj Chandrasekaran +53 · 1 citation
Biochemistry, Genetics and Molecular Biology · Engineering · #Cell Image Analysis Techniques #FOS: Biological sciences #Image Processing Techniques and Applications #Quantitative Methods (q-bio.QM) #Single-cell and spatial transcriptomics
- A versatile information retrieval framework for evaluating profile strength and similarity
2025/06/04 by Alexandr A. Kalinin, John Arévalo, Erik Serrano +9 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · #Cell Image Analysis Techniques #Computational Drug Discovery Methods #Single-cell and spatial transcriptomics