Alexander Karollus
- AlphaGenome: advancing regulatory variant effect prediction with a unified DNA sequence model
2025/06/27 by Žiga Avsec, Natasha S. Latysheva, Jun Cheng +24 · 3 voices · 8 citations
Biochemistry, Genetics and Molecular Biology · #Genomics and Chromatin Dynamics #Genomics and Phylogenetic Studies #RNA and protein synthesis mechanisms
- scooby: Modeling multi-modal genomic profiles from DNA sequence at single-cell resolution
2024/09/22 by Johannes Hingerl, Laura D. Martens, Alexander Karollus +4 · 1 voice · 5 citations
Biochemistry, Genetics and Molecular Biology · #Single-cell and spatial transcriptomics #Cancer Genomics and Diagnostics #RNA modifications and cancer
- Flashzoi: An enhanced Borzoi for accelerated genomic analysis
2024/12/21 by Johannes Hingerl, Alexander Karollus, Julien Gagneur · 1 voice · 2 citations
Computer Science · #Algorithms and Data Compression
- Nucleotide dependency analysis of DNA language models reveals genomic functional elements
2024/07/27 by Pedro Tomaz da Silva, Alexander Karollus, Johannes Hingerl +5 · 1 voice · 2 citations
Biochemistry, Genetics and Molecular Biology · #RNA and protein synthesis mechanisms #Genomics and Phylogenetic Studies #Machine Learning in Bioinformatics