Mehran Karimzadeh
- Umap and Bismap: quantifying genome and methylome mappability
2018/07/22 by Mehran Karimzadeh, Carl Ernst, Anshul Kundaje +1 · 1 voice · 6 citations
Biochemistry, Genetics and Molecular Biology · #Epigenetics and DNA Methylation #Genomics and Phylogenetic Studies #RNA modifications and cancer
- Transformers and genome language models
2025/03/13 by Micaela E. Consens, Micaela Elisa Consens, C Dufault +9 · 1 voice · 7 citations
Biochemistry, Genetics and Molecular Biology · Computer Science · #Evolutionary Algorithms and Applications #Genomics and Phylogenetic Studies #Machine Learning in Bioinformatics
- Semi-automated genome annotation using epigenomic data and Segway
2016/10/17 by Eric G. Roberts, Mickaël Mendez, Coby Viner +7 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · #Gene expression and cancer classification #Genomics and Chromatin Dynamics #Genomics and Phylogenetic Studies
- Deep generative AI models analyzing circulating orphan non-coding RNAs enable detection of early-stage lung cancer
2024/11/21 by Mehran Karimzadeh, Amir Momen-Roknabadi, Taylor B. Cavazos +26 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · #Cancer Genomics and Diagnostics #Cancer-related molecular mechanisms research #Single-cell and spatial transcriptomics