Wolde, Pieter Rein ten
- Fundamental Limits to Cellular Sensing
2015/05/25 by Wolde, Pieter Rein ten, Becker, Nils B., Ouldridge, Thomas E. +1 · 3 citations
#Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Molecular Networks (q-bio.MN) #Subcellular Processes (q-bio.SC)
- Trade-offs between cost and information in cellular prediction
2023/01/10 by Tjalma, Age J., Galstyan, Vahe, Goedhart, Jeroen +3 · 4 citations
#Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Molecular Networks (q-bio.MN)
- Chemical models of genetic toggle switches
2004/10/04 by Patrick B. Warren, Warren, Patrick B., Pieter Rein ten Wolde +1 · 1 citation
Biochemistry, Genetics and Molecular Biology · Chemistry · #Evolution and Genetic Dynamics #Gene Regulatory Network Analysis #q-bio.MN #thermodynamics and calorimetric analyses
- eGFRD in all dimensions
2017/08/30 by Sokolowski, Thomas R., Paijmans, Joris, Bossen, Laurens +7 · 1 citation
#Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Physical sciences #Molecular Networks (q-bio.MN) #Quantitative Methods (q-bio.QM) #Soft Condensed Matter (cond-mat.soft)
- Synchronous replication initiation of multiple origins
2023/04/03 by Berger, Mareike, Wolde, Pieter Rein ten · 1 citation
#Biological Physics (physics.bio-ph) #Computational Physics (physics.comp-ph) #FOS: Physical sciences
- Exact computation of Transfer Entropy with Path Weight Sampling
2024/09/03 by Avishek Das, Das, Avishek, Pieter Rein ten Wolde +1 · 3 citations
Decision Sciences · #Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Computer and information sciences #FOS: Physical sciences #Information Theory (cs.IT) #Molecular Networks (q-bio.MN) #Probabilistic and Robust Engineering Design #Soft Condensed Matter (cond-mat.soft) #Statistical Mechanics (cond-mat.stat-mech)
- ML-PWS: Estimating the Mutual Information Between Experimental Time Series Using Neural Networks
2025/08/22 by Reinhardt, Manuel, Tkačik, Gašper, Wolde, Pieter Rein ten · 2 citations
#Biological Physics (physics.bio-ph) #FOS: Biological sciences #FOS: Computer and information sciences #FOS: Physical sciences #Information Theory (cs.IT) #Machine Learning (cs.LG) #Neurons and Cognition (q-bio.NC) #Statistical Mechanics (cond-mat.stat-mech)
- Bit reset protocols that obey activity-constrained speed limits do not minimize work for a given speed
2025/01/08 by Daan Mulder, Thomas E. Ouldridge, Mulder, Daan +3 · 1 citation
Engineering · Computer Science · #Advanced Memory and Neural Computing #Parallel Computing and Optimization Techniques #Analog and Mixed-Signal Circuit Design