Hoyt, Charles Tapley

1. PyKEEN 1.0: A Python Library for Training and Evaluating Knowledge Graph Embeddings
   2020/07/28 by Mehdi Ali, Ali, Mehdi, Max Berrendorf +11 · 12 citations
   Computer Science · Biochemistry, Genetics and Molecular Biology · #Advanced Graph Neural Networks #Topic Modeling #Bioinformatics and Genomic Networks
2. The role of metadata in reproducible computational research
   2020/06/15 by Leipzig, Jeremy, Nüst, Daniel, Hoyt, Charles Tapley +3 · 4 citations
   #Digital Libraries (cs.DL) #FOS: Computer and information sciences #Software Engineering (cs.SE)
3. An Open-Source Knowledge Graph Ecosystem for the Life Sciences
   2023/07/11 by Callahan, Tiffany J., Tripodi, Ignacio J., Stefanski, Adrianne L. +29 · 5 citations
   #Artificial Intelligence (cs.AI) #Computational Engineering #FOS: Computer and information sciences #Finance #and Science (cs.CE)
4. An Open Challenge for Inductive Link Prediction on Knowledge Graphs
   2022/03/03 by Mikhail Galkin, Max Berrendorf, Galkin, Mikhail +3 · 3 citations
   Computer Science · #Advanced Graph Neural Networks #Topic Modeling #Bayesian Modeling and Causal Inference
5. A Unified Framework for Rank-based Evaluation Metrics for Link Prediction in Knowledge Graphs
   2022/03/14 by Charles Tapley Hoyt, Max Berrendorf, Hoyt, Charles Tapley +7 · 2 citations
   Computer Science · Physics and Astronomy · #Advanced Graph Neural Networks #Artificial Intelligence (cs.AI) #Bayesian Modeling and Causal Inference #Complex Network Analysis Techniques #FOS: Computer and information sciences #Graph Theory and Algorithms #Machine Learning (cs.LG)
6. The Cell Ontology in the age of single-cell omics
   2025/06/10 by Tan, Shawn Zheng Kai, Puig-Barbe, Aleix, Goutte-Gattat, Damien +32 · 2 citations
   #FOS: Biological sciences #FOS: Computer and information sciences #Information Retrieval (cs.IR) #Other Quantitative Biology (q-bio.OT)
7. Experimental design for causal query estimation in partially observed biomolecular networks
   2022/10/24 by Sara Mohammad-Taheri, Mohammad-Taheri, Sara, Vartika Tewari +13 · 1 citation
   Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Biomolecules (q-bio.BM) #FOS: Biological sciences #Gene Regulatory Network Analysis #Gene expression and cancer classification