Katharina J. Hoff
- BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database
2021/01/06 by Tomáš Brůna, Katharina J. Hoff, Alexandre Lomsadze +2 · 87 citations
Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Genomics and Phylogenetic Studies #RNA and protein synthesis mechanisms #Phytoplasmas and Hemiptera pathogens
- Tiberius: end-to-end deep learning with an HMM for gene prediction
2024/11/13 by Lars Gabriel, Felix Becker, Katharina J. Hoff +1 · 2 voices · 10 citations
Biochemistry, Genetics and Molecular Biology · #Machine Learning in Bioinformatics #Genomics and Chromatin Dynamics #Genomics and Phylogenetic Studies
- Navigating Eukaryotic Genome Annotation Pipelines: A Route Map to BRAKER, Galba, and TSEBRA
2024/03/28 by Tomáš Brůna, Lars Gabriel, Brůna, Tomáš +3 · 5 citations
Biochemistry, Genetics and Molecular Biology · #FOS: Biological sciences #Genetics, Bioinformatics, and Biomedical Research #Genomics (q-bio.GN) #Genomics and Phylogenetic Studies
- A roadmap for equitable reuse of public microbiome data
2025/09/26 by Laura A. Hug, Roland Hatzenpichler, Cristina Moraru +97 · 3 voices · 8 citations
Computer Science · Decision Sciences · Biochemistry, Genetics and Molecular Biology · #Research Data Management Practices #Scientific Computing and Data Management #Genomics and Phylogenetic Studies
- A reference genome for ecological restoration of the sunflower sea star, Pycnopodia helianthoides
2023/09/20 by Lauren M. Schiebelhut, Melissa B. DeBiasse, Lars Gabriel +2 · 1 voice · 1 citation
Agricultural and Biological Sciences · Earth and Planetary Sciences · Environmental Science · #Echinoderm biology and ecology #Marine and coastal plant biology #Polar Research and Ecology