Cali, Damla Senol

1. GenASM: A High-Performance, Low-Power Approximate String Matching\n Acceleration Framework for Genome Sequence Analysis
   2020/09/16 by Damla Senol Cali, Cali, Damla Senol, Gurpreet S. Kalsi +29 · 4 citations
   Biochemistry, Genetics and Molecular Biology · Computer Science · #Algorithms and Data Compression #FOS: Biological sciences #FOS: Computer and information sciences #Genomics (q-bio.GN) #Genomics and Phylogenetic Studies #Hardware Architecture (cs.AR) #Network Packet Processing and Optimization
2. GenPIP: In-Memory Acceleration of Genome Analysis via Tight Integration of Basecalling and Read Mapping
   2022/09/18 by Mao, Haiyu, Alser, Mohammed, Sadrosadati, Mohammad +6 · 2 citations
   #Data Structures and Algorithms (cs.DS) #FOS: Biological sciences #FOS: Computer and information sciences #Genomics (q-bio.GN) #Hardware Architecture (cs.AR)
3. ApHMM: Accelerating Profile Hidden Markov Models for Fast and Energy-Efficient Genome Analysis
   2022/07/20 by Firtina, Can, Pillai, Kamlesh, Kalsi, Gurpreet S. +10 · 1 citation
   #Artificial Intelligence (cs.AI) #FOS: Biological sciences #FOS: Computer and information sciences #Genomics (q-bio.GN) #Hardware Architecture (cs.AR) #Machine Learning (cs.LG) #Quantitative Methods (q-bio.QM)