Rhodes, John A.
- A concise proof of Kruskal's theorem on tensor decomposition
2009/01/13 by Rhodes, John A. · 4 citations
#15A18 #15A69 #15A72 #FOS: Mathematics #Rings and Algebras (math.RA)
- Phylogenetic ideals and varieties for the general Markov model
2004/10/28 by Elizabeth S. Allman, John A. Rhodes, Allman, Elizabeth S. +1 · 3 citations
Computer Science · Mathematics · #14J99 #60J20 #92D15 #Advanced Combinatorial Mathematics #Algebraic Geometry (math.AG) #FOS: Biological sciences #FOS: Mathematics #Polynomial and algebraic computation #Populations and Evolution (q-bio.PE) #Statistics Theory (math.ST) #Topological and Geometric Data Analysis
- The Tree of Blobs of a Species Network: Identifiability under the Coalescent
2022/05/06 by Elizabeth S. Allman, Allman, Elizabeth S., Hector Baños +5 · 5 citations
Biochemistry, Genetics and Molecular Biology · #92D15 #Bioinformatics and Genomic Networks #FOS: Biological sciences #FOS: Mathematics #Genetic diversity and population structure #Genomics and Phylogenetic Studies #Populations and Evolution (q-bio.PE) #Statistics Theory (math.ST)
- Parameter identifiability of discrete Bayesian networks with hidden\n variables
2014/06/02 by Elizabeth S. Allman, John A. Rhodes, Allman, Elizabeth S. +5 · 2 citations
Computer Science · #Bayesian Modeling and Causal Inference
- Identifiability of Large Phylogenetic Mixture Models
2010/11/18 by Rhodes, John A., Sullivant, Seth · 2 citations
#Algebraic Geometry (math.AG) #FOS: Biological sciences #FOS: Mathematics #Populations and Evolution (q-bio.PE) #Statistics Theory (math.ST)
- Identifying circular orders for blobs in phylogenetic networks
2024/02/18 by John A. Rhodes, Rhodes, John A., Hector Baños +5 · 4 citations
Biochemistry, Genetics and Molecular Biology · #Genomics and Phylogenetic Studies #Fractal and DNA sequence analysis #Genome Rearrangement Algorithms
- Identifiability of 2-tree mixtures for group-based models
2009/09/10 by Elizabeth S. Allman, Sonja Petrović, Allman, Elizabeth S. +5 · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · #Algebraic Geometry (math.AG) #Algorithms and Data Compression #FOS: Biological sciences #FOS: Mathematics #Genomics and Phylogenetic Studies #Glycosylation and Glycoproteins Research #Populations and Evolution (q-bio.PE)
- Parameter identifiability in a class of random graph mixture models
2010/06/04 by Allman, Elizabeth S., Matias, Catherine, Rhodes, John A. · 1 citation
#FOS: Mathematics #Statistics Theory (math.ST)
- Tensors of Nonnegative Rank Two
2013/05/02 by Allman, Elizabeth S., Rhodes, John A., Sturmfels, Bernd +1 · 1 citation
#14P10 #15A69 #62H17 #Algebraic Geometry (math.AG) #FOS: Mathematics #Statistics Theory (math.ST)
- Species tree inference from gene splits by Unrooted STAR methods
2016/04/18 by Allman, Elizabeth S., Degnan, James H., Rhodes, John A. · 1 citation
#92D15 #FOS: Biological sciences #FOS: Mathematics #Populations and Evolution (q-bio.PE) #Statistics Theory (math.ST)
- Topological metrizations of trees, and new quartet methods of tree\n inference
2017/04/06 by John A. Rhodes, Rhodes, John A. · 2 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #92D15 #FOS: Biological sciences #Genetic diversity and population structure #Genomics and Phylogenetic Studies #Plant and animal studies #Populations and Evolution (q-bio.PE)
- Hypothesis testing near singularities and boundaries
2018/06/22 by Mitchell, Jonathan D., Allman, Elizabeth S., Rhodes, John A. · 1 citation
#62E17 #92D15 #FOS: Biological sciences #FOS: Mathematics #Populations and Evolution (q-bio.PE) #Statistics Theory (math.ST)
- NJst and ASTRID are not statistically consistent under a random model of missing data
2020/01/22 by John A. Rhodes, Rhodes, John A., Michael Nute +3 · 1 citation
Medicine · #92D15 (primary) #FOS: Biological sciences #Fetal and Pediatric Neurological Disorders #MRI in cancer diagnosis #Populations and Evolution (q-bio.PE) #Radiomics and Machine Learning in Medical Imaging
- Parameter identifiability for a profile mixture model of protein\n evolution
2020/07/04 by Samaneh Yourdkhani, Elizabeth S. Allman, Yourdkhani, Samaneh +3 · 1 citation
Biochemistry, Genetics and Molecular Biology · Materials Science · #92D15 (Primary) 92D20 (Secondary) #Enzyme Structure and Function #FOS: Biological sciences #Genomics and Phylogenetic Studies #Populations and Evolution (q-bio.PE) #Protein Structure and Dynamics
- Beyond level-1: Identifiability of a class of galled tree-child networks
2025/04/29 by Elizabeth S. Allman, Allman, Elizabeth S., Cécile Ané +5 · 3 citations
Biochemistry, Genetics and Molecular Biology · #Genomics and Phylogenetic Studies #Genome Rearrangement Algorithms #Bioinformatics and Genomic Networks