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Boas Pucker

  1. The evolution of betalain biosynthesis in Caryophyllales
    2019/06/07 by Alfonso Timoneda, Tao Feng, Hester Sheehan +6 · 36 citations
    Agricultural and Biological Sciences · #Botanical Research and Applications #Plant Diversity and Evolution #Plant Taxonomy and Phylogenetics
  2. Plant genome sequence assembly in the era of long reads: Progress, challenges and future directions
    2022/01/01 by Boas Pucker, Iker Irisarri, Jan de Vries +1 · 4 voices · 18 citations
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Genomics and Phylogenetic Studies #Chromosomal and Genetic Variations #Photosynthetic Processes and Mechanisms
  3. Large scale genomic rearrangements in selected Arabidopsis thaliana T-DNA lines are caused by T-DNA insertion mutagenesis
    2021/08/06 by Boas Pucker, Nils Kleinbölting, Bernd Weißhaar · 3 voices · 32 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Chromosomal and Genetic Variations #Plant Molecular Biology Research #Plant tissue culture and regeneration
  4. Assessing and Assuring Program Quality
    2011/01/01 by Boas Pucker, Dirk Selmar, Diane Edelman +2 · 2 voices · 7 citations
    Decision Sciences · #Evaluation and Performance Assessment
  5. Automatic annotation of the bHLH gene family in plants
    2023/12/15 by Corinna Thoben, Boas Pucker · 3 voices · 20 citations
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Plant Gene Expression Analysis #Plant Molecular Biology Research #Photosynthetic Processes and Mechanisms
  6. IPO Underpricing: Evidence From Malaysia
    2011/06/01 by Hester Sheehan, Tao Feng, Nathanael Walker‐Hale +15 · 1 voice · 7 citations
    Agricultural and Biological Sciences · Business, Management and Accounting · Economics, Econometrics and Finance · #Botanical Research and Applications #Cassava research and cyanide #Corporate Finance and Governance #Firm Innovation and Growth #Plant Diversity and Evolution #Private Equity and Venture Capital
  7. Genome sequence of the ornamental plant Digitalis purpurea reveals the molecular basis of flower color and morphology variation
    2024/02/15 by Jakob Maximilian Horz, Katharina Wolff, Ronja Friedhoff +1 · 5 voices · 9 citations
    Biochemistry, Genetics and Molecular Biology · Medicine · #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis #Phytochemicals and Antioxidant Activities
  8. The reuse of public datasets in the life sciences: potential risks and rewards
    2020/09/22 by Katharina Sielemann, Alenka Hafner, Boas Pucker · 1 voice · 6 citations
    Biochemistry, Genetics and Molecular Biology · Computer Science · Decision Sciences · #Genomics and Phylogenetic Studies #Research Data Management Practices #Scientific Computing and Data Management
  9. Multiple mechanisms explain loss of anthocyanins from betalain‐pigmented Caryophyllales, including repeated wholesale loss of a key anthocyanidin synthesis enzyme
    2023/10/28 by Boas Pucker, Nathanael Walker‐Hale, Jasmina Dzurlic +5 · 4 voices · 5 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Botanical Research and Applications #Plant Diversity and Evolution #Plant Gene Expression Analysis
  10. Out of the blue: Family-wide loss of anthocyanin biosynthesis in Cucurbitaceae
    2025/10/07 by Nancy Choudhary, Marie Hagedorn, Boas Pucker · 5 voices · 4 citations
    Biochemistry, Genetics and Molecular Biology · #Advances in Cucurbitaceae Research #Genomics and Phylogenetic Studies #Genetic diversity and population structure
  11. Genome sequence and RNA-seq analysis reveal genetic basis of flower coloration in the giant water lily Victoria cruziana
    2024/06/17 by Melina Sophie Nowak, Benjamin Harder, Samuel Nestor Meckoni +3 · 4 voices · 4 citations
    Earth and Planetary Sciences · #Marine and coastal plant biology
  12. Automatic identification and annotation of MYB gene family members in plants
    2022/03/19 by Boas Pucker · 2 voices · 11 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Plant Gene Expression Analysis #Plant Molecular Biology Research #Plant tissue culture and regeneration
  13. Auxotrophy to Xeno-DNA: an exploration of combinatorial mechanisms for a high-fidelity biosafety system for synthetic biology applications
    2018/08/03 by Christopher M. Whitford, Saskia Dymek, Denise Kerkhoff +7 · 1 voice · 2 citations
    Biochemistry, Genetics and Molecular Biology · #Bacterial Genetics and Biotechnology #CRISPR and Genetic Engineering #Gene Regulatory Network Analysis
  14. KIPEs3: Automatic annotation of biosynthesis pathways
    2023/11/16 by Andreas Rempel, Nancy Choudhary, Boas Pucker · 3 voices · 5 citations
    Biochemistry, Genetics and Molecular Biology · #Photosynthetic Processes and Mechanisms #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis
  15. Three R2R3-MYB transcription factors from banana (Musa acuminata) activate structural anthocyanin biosynthesis genes as part of an MBW complex
    2023/06/13 by Mareike Busche, Boas Pucker, Bernd Weißhaar +1 · 2 voices · 5 citations
    Biochemistry, Genetics and Molecular Biology · Medicine · #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis #Phytochemicals and Antioxidant Activities
  16. Genetic factors explaining anthocyanin pigmentation differences
    2024/07/03 by Maria F. Marin-Recinos, Boas Pucker · 3 voices · 5 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Light effects on plants #Plant Gene Expression Analysis #Plant Molecular Biology Research
  17. Apiaceae FNS I originated from F3H through tandem gene duplication
    2023/01/19 by Boas Pucker, Massimo Iorizzo · 2 voices · 6 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Plant Gene Expression Analysis #Plant Molecular Biology Research #Plant biochemistry and biosynthesis
  18. Data reuse in agricultural genomics research: challenges and recommendations
    2025/01/01 by Alenka Hafner, Victoria L. DeLeo, Cecilia Deng +9 · 5 voices · 2 citations
    Computer Science · Environmental Science · #Research Data Management Practices #Environmental DNA in Biodiversity Studies
  19. NAVIP: Unraveling the Influence of Neighboring Small Sequence Variants on Functional Impact Prediction
    2019/04/04 by Jan-Simon Baasner, Andreas Rempel, Dakota Howard +1 · 3 voices · 3 citations
    Biochemistry, Genetics and Molecular Biology · Engineering · #Genomics and Phylogenetic Studies #RNA and protein synthesis mechanisms #Biofuel production and bioconversion
  20. Phylogenomics and metabolic engineering reveal a conserved gene cluster in Solanaceae plants for withanolide biosynthesis
    2024/09/28 by Samuel Edward Hakim, Nancy Choudhary, Karan Malhotra +10 · 2 voices · 4 citations
    Medicine · #Medicinal Plants and Neuroprotection #Phytochemicals and Medicinal Plants
  21. Mapping-by-Sequencing Reveals Genomic Regions Associated with Seed Quality Parameters in Brassica napus
    2022/06/23 by Hanna Marie Schilbert, Boas Pucker, David Ries +7 · 2 voices · 3 citations
    Biochemistry, Genetics and Molecular Biology · #Genomics, phytochemicals, and oxidative stress #Lipid metabolism and biosynthesis #Nitrogen and Sulfur Effects on Brassica
  22. Phylogenetic placement of Ceratophyllum submersum based on a complete plastome sequence derived from nanopore long read sequencing data
    2023/08/25 by Samuel Nestor Meckoni, Benneth Nass, Boas Pucker · 2 voices · 3 citations
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Plant Pathogens and Fungal Diseases #Plant and Fungal Species Descriptions #Mycorrhizal Fungi and Plant Interactions
  23. Repeat turnover meets stable chromosomes: repetitive DNA sequences mark speciation and gene pool boundaries in sugar beet and wild beets
    2023/12/21 by Nicola Schmidt, Katharina Sielemann, Sarah Breitenbach +5 · 3 voices · 1 citation
    Agricultural and Biological Sciences · #Chromosomal and Genetic Variations #Plant Disease Resistance and Genetics #Plant Virus Research Studies
  24. Mapping-based genome size estimation
    2025/05/14 by Shakunthala Natarajan, Jessica Gehrke, Boas Pucker · 4 voices · 2 citations
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Genomics and Phylogenetic Studies #Chromosomal and Genetic Variations #Genetic diversity and population structure
  25. Genomic characterization of a nematode tolerance locus in sugar beet
    2023/12/06 by Katharina Sielemann, Boas Pucker, Elena Orsini +7 · 3 voices · 3 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Genetic Mapping and Diversity in Plants and Animals #Nematode management and characterization studies #Plant Pathogens and Resistance
  26. Diversity and ecological functions of anthocyanins
    2025/12/23 by Nele Grünig, Jakob Maximilian Horz, Boas Pucker · 1 voice · 7 citations
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Plant Gene Expression Analysis #Horticultural and Viticultural Research #Light effects on plants
  27. Cookbook for plant genome sequences
    2026/02/06 by Julie Anne Vieira Salgado de Oliveira, Nancy Choudhary, Samuel Nestor Meckoni +3 · 4 voices · 3 citations
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Genomics and Phylogenetic Studies #Chromosomal and Genetic Variations #Genetics, Bioinformatics, and Biomedical Research
  28. Isoprenoid biosynthesis regulation in poplars by methylerythritol phosphate and mevalonic acid pathways
    2022/09/30 by Ali Movahedi, Hui Wei, Boas Pucker +7 · 2 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · Medicine · #Antioxidant Activity and Oxidative Stress #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis
  29. Integrating Molecular Biology and Bioinformatics Education
    2019/05/30 by Boas Pucker, Hanna Marie Schilbert, S. Schumacher · 3 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · Engineering · #Genetics, Bioinformatics, and Biomedical Research #Genomics and Phylogenetic Studies #Biomedical and Engineering Education
  30. Phylogenomics and metabolic engineering reveal a conserved gene cluster in Solanaceae plants for withanolide biosynthesis
    2025/07/10 by Samuel Edward Hakim, Nancy Choudhary, Karan Malhotra +11 · 5 voices · 1 citation
    Medicine · Biochemistry, Genetics and Molecular Biology · #Phytochemicals and Medicinal Plants #Medicinal Plants and Neuroprotection #Plant biochemistry and biosynthesis
  31. Vaccinium as a comparative system for understanding of complex flavonoid accumulation profiles and regulation in fruit
    2023/05/02 by Nick W. Albert, Massimo Iorizzo, Molla F. Mengist +8 · 2 voices · 2 citations
    Biochemistry, Genetics and Molecular Biology · Medicine · #Phytochemicals and Antioxidant Activities #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis
  32. Evolutionary Rewiring of Anthocyanin Biosynthesis Pathway in Poaceae
    2025/09/21 by Najnin Khatun, Aidan Jones, Avery Rahe +2 · 4 voices · 3 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Horticultural and Viticultural Research #Genetic Mapping and Diversity in Plants and Animals #Plant Gene Expression Analysis
  33. Complete pan-plastome sequences enable high resolution phylogenetic classification of sugar beet and closely related crop wild relatives
    2022/02/09 by Katharina Sielemann, Boas Pucker, Nicola Schmidt +4 · 2 voices · 4 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Sugarcane Cultivation and Processing #Genomics and Phylogenetic Studies #Botanical Research and Applications
  34. Screening of Structurally Distinct Lycopene β-Cyclases for Production of the Cyclic C40 Carotenoids β-Carotene and Astaxanthin by Corynebacterium glutamicum
    2023/05/10 by Vanessa L. Göttl, Boas Pucker, Volker F. Wendisch +1 · 2 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · Energy · #Algal biology and biofuel production #Photosynthetic Processes and Mechanisms #Plant biochemistry and biosynthesis
  35. Genome sequence of the medicinal plant Tropaeolum majus provides insights into flavonoid biosynthesis
    2024/11/04 by Ronja Friedhoff, Ute Wittstock, Boas Pucker · 2 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · Chemistry · Medicine · #Chromatography in Natural Products #Fungal Biology and Applications #Plant Gene Expression Analysis
  36. KIPEs3: Automatic annotation of biosynthesis pathways
    2022/07/02 by Andreas Rempel, Nancy Choudhary, Boas Pucker · 1 voice · 2 citations
    Biochemistry, Genetics and Molecular Biology · #Photosynthetic Processes and Mechanisms #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis
  37. Identification of annotation artifacts concerning the chalcone synthase (CHS)
    2023/06/20 by Martin Bartas, Adriana Volná, Jiří Červeň +1 · 2 voices · 1 citation
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis #Plant-Microbe Interactions and Immunity
  38. Flavonols affect the interrelated glucosinolate and camalexin biosynthetic pathways in Arabidopsis thaliana
    2023/10/04 by Jogindra Naik, Shivi Tyagi, Ruchika Rajput +6 · 2 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Genomics, phytochemicals, and oxidative stress #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis
  39. Functional Annotation – How to Tackle the Bottleneck in Plant Genomics
    2024/02/14 by Boas Pucker · 1 voice · 2 citations
    Biochemistry, Genetics and Molecular Biology · #Genetics, Bioinformatics, and Biomedical Research #Genomics and Phylogenetic Studies #Machine Learning in Bioinformatics
  40. Conserved amino acid residues and gene expression patterns associated with the substrate preferences of the competing enzymes FLS and DFR
    2024/08/28 by Nancy Choudhary, Boas Pucker · 2 voices · 3 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Bioactive natural compounds #Plant Gene Expression Analysis #Plant Molecular Biology Research
  41. Cacao genome sequence reveals insights into the flavonoid biosynthesis
    2024/11/25 by Maria Fernanda Marin Recinos, Sarah Winnier, Kiersten Lagerhausen +6 · 2 voices · 1 citation
    Agricultural and Biological Sciences · #Cocoa and Sweet Potato Agronomy #Food Chemistry and Fat Analysis
  42. CoExpPhylo – a novel pipeline for biosynthesis gene discovery
    2025/09/22 by Nele Grünig, Boas Pucker · 3 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Plant Gene Expression Analysis #Genomics and Phylogenetic Studies #Plant biochemistry and biosynthesis
  43. Dark side of anthocyanin pigmentation
    2025/05/28 by Katharina Wolff, Boas Pucker · 4 voices
    Biochemistry, Genetics and Molecular Biology · Medicine · #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis #Phytochemicals and Antioxidant Activities
  44. Efficient assembly of plant genomes: A case study with evolutionary implications in Ranunculus (Ranunculaceae)
    2023/08/11 by Kevin Karbstein, Nancy Choudhary, Ting Xie +13 · 1 voice · 1 citation
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Chromosomal and Genetic Variations #Genomics and Phylogenetic Studies #Plant Taxonomy and Phylogenetics
  45. NAVIP: Unraveling the influence of neighboring small sequence variants on functional impact prediction
    2025/02/18 by Jan-Simon Baasner, Andreas Rempel, Dakota Howard +1 · 3 voices
    Biochemistry, Genetics and Molecular Biology · Engineering · #Genomics and Phylogenetic Studies #Biofuel production and bioconversion #RNA and protein synthesis mechanisms
  46. Comparison of read mapping and variant calling tools for the analysis of plant NGS data
    2020/03/11 by Hanna Marie Schilbert, Andreas Rempel, Boas Pucker · 2 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Genomics and Phylogenetic Studies #Chromosomal and Genetic Variations #Genetic diversity and population structure
  47. Genome sequence of the blue flowering Centaurea cyanus
    2025/01/31 by Chiara Marie Dassow, Ronja Friedhoff, Boas Pucker · 3 voices
    Biochemistry, Genetics and Molecular Biology · #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis #Photosynthetic Processes and Mechanisms
  48. Pangenome of cultivated beet and crop wild relatives reveals parental relationships of a tetraploid wild beet
    2023/06/30 by Katharina Sielemann, Nicola Schmidt, J. Guzik +7 · 3 voices · 3 citations
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Chromosomal and Genetic Variations #Genetic diversity and population structure #Plant Virus Research Studies
  49. Tracing the evolutionary and genetic footprints of atmospheric tillandsioids transition from land to air
    2024/11/06 by Xiaolong Lyu, Ping Li, Liang Jin +14 · 3 voices
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Plant and animal studies #Biocrusts and Microbial Ecology #Insect and Arachnid Ecology and Behavior
  50. CoExpPhylo – A Novel Pipeline for Biosynthesis Gene Discovery
    2025/04/09 by Nele Grünig, Boas Pucker · 3 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Microbial Metabolic Engineering and Bioproduction
  51. Data literacy in genome research
    2023/12/01 by Katharina Wolff, Ronja Friedhoff, F. Schwarzer +1 · 3 voices
    Biochemistry, Genetics and Molecular Biology · #Genetics, Bioinformatics, and Biomedical Research #Genomics and Phylogenetic Studies #Gene expression and cancer classification
  52. The R2R3-MYB gene family in Cicer arietinum: genome-wide identification and expression analysis leads to functional characterization of proanthocyanidin biosynthesis regulators in the seed coat
    2022/08/29 by Ruchika Rajput, Shivi Tyagi, Jogindra Naik +3 · 2 voices · 1 citation
    Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Plant Gene Expression Analysis #Plant Molecular Biology Research #Plant Stress Responses and Tolerance
  53. Cookbook for Plant Genome Sequences
    2025/09/08 by Julie Anne Vieira Salgado de Oliveira, Nancy Choudhary, Samuel Nestor Meckoni +3 · 2 voices
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Genomics and Phylogenetic Studies #Chromosomal and Genetic Variations
  54. The Role of the United States Government in Early Education During the Depression of the 1930s.
    1989/08/11 by Tao Feng, Boas Pucker, Tianhui Kuang +11 · 3 voices
    Social Sciences · #Diverse Education Studies and Reforms #Historical Education Studies Worldwide #School Choice and Performance
  55. Metabolic fingerprinting reveals roles of Arabidopsis thaliana BGLU1, BGLU3, and BGLU4 in glycosylation of various flavonoids
    2024/11/26 by Jana-Freja Frommann, Boas Pucker, Lennart Malte Sielmann +4 · 2 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · #Photosynthetic Processes and Mechanisms #Plant Gene Expression Analysis #Plant biochemistry and biosynthesis
  56. Anthocyanins and betalains in evolution: Why mutual exclusion remains the best‐supported model
    2026/07/02 by Boas Pucker, Mohsin Khan · 2 voices
    Agricultural and Biological Sciences · Chemistry · #Botanical Research and Applications #Cassava research and cyanide #Chemical synthesis and alkaloids
  57. NanoPlasmiQC: Full plasmid sequencing with ONT long-reads and automatic data analysis
    2026/04/03 by Julie Anne V.S. de Oliveira, Vinson Ng, Katharina Wolff +1 · 2 voices
    Biochemistry, Genetics and Molecular Biology · Environmental Science · #Genomics and Phylogenetic Studies #Advanced Electron Microscopy Techniques and Applications #Bacteriophages and microbial interactions
  58. Genome sequence of Tacca chantrieri reveals the genetic basis of floral pigmentation
    2026/03/19 by Julie Anne V.S. de Oliveira, Boas Pucker · 3 voices · 1 citation
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Plant Gene Expression Analysis #melanin and skin pigmentation #Plant Genetic and Mutation Studies
  59. Genome sequence of the ornamental plant Digitalis purpurea reveals the molecular basis of flower color and morphology variation
    2026/05/01 by Jakob Maximilian Horz, Katharina Wolff, Ronja Friedhoff +1 · 1 voice · 1 citation
    Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Plant Gene Expression Analysis #Plant Molecular Biology Research #Light effects on plants