Bas E. Dutilh
- Eleven grand challenges in single-cell data science
2020/02/07 by David Lähnemann, Johannes Köster, Ewa Szczurek +48 · 34 citations
Biochemistry, Genetics and Molecular Biology · #Cell Image Analysis Techniques #Gene Regulatory Network Analysis #Single-cell and spatial transcriptomics
- FACIL: Fast and Accurate Genetic Code Inference and Logo
2011/06/08 by Bas E. Dutilh, Rasa Jurgelenaite, Radek Szklarczyk +10 · 2 citations
Environmental Science · Biochemistry, Genetics and Molecular Biology · #Environmental DNA in Biodiversity Studies #Genomics and Phylogenetic Studies #Protist diversity and phylogeny
- Differentiating between viruses and virus species by writing their names correctly
2022/01/19 by F. Murilo Zerbini, Francisco Murilo Zerbini, Stuart G. Siddell +25 · 1 voice · 4 citations
Medicine · Biochemistry, Genetics and Molecular Biology · Environmental Science · #Zoonotic diseases and public health #Yersinia bacterium, plague, ectoparasites research #Environmental and Biological Research in Conflict Zones
- Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024)
2024/11/01 by Peter Simmonds, Evelien M. Adriaenssens, Elliot J. Lefkowitz +38 · 5 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Environmental Science · #Bacteriophages and microbial interactions #Plant Virus Research Studies #Plant and Fungal Interactions Research
- Ultrafast and accurate sequence alignment and clustering of viral genomes
2025/05/15 by Andrzej Zieleziński, Adam Gudyś, Jakub Barylski +4 · 1 voice · 3 citations
Environmental Science · Biochemistry, Genetics and Molecular Biology · #Bacteriophages and microbial interactions #Genomics and Phylogenetic Studies #RNA and protein synthesis mechanisms
- The new scope of virus taxonomy: partitioning the virosphere into 15 hierarchical ranks
2020/04/27 by Alexander E. Gorbalenya, Mart Krupovìč, Arcady Mushegian +20 · 3 citations
Medicine · Environmental Science · #Viral Infections and Outbreaks Research #Bacteriophages and microbial interactions #Viral gastroenteritis research and epidemiology
- Examining the healthy human microbiome concept
2024/10/23 by Raphaela Joos, Katy Boucher, Manimozhiyan Arumugam +76 · 1 voice · 2 citations
Biochemistry, Genetics and Molecular Biology · Medicine · #Clostridium difficile and Clostridium perfringens research #Diet and metabolism studies #Gut microbiota and health
- Spatial structure: shaping the ecology and evolution of microbial communities
2026/01/01 by Marcel Bäcker, Hilje M. Doekes, Daniel Garza +6 · 2 voices · 1 citation
Environmental Science · Social Sciences · Biochemistry, Genetics and Molecular Biology · #Microbial Community Ecology and Physiology #Evolutionary Game Theory and Cooperation #Bacterial biofilms and quorum sensing
- Improving genome-scale metabolic models of incomplete genomes with deep learning
2024/11/07 by Meine D. Boer, Chrats Melkonian, Haris Zafeiropoulos +3 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · Engineering · #Biofuel production and bioconversion #Genomics and Phylogenetic Studies #Microbial Metabolic Engineering and Bioproduction
- Pharmacomicrobiomics: The Impact of Human Microbiome Variations on Systems Pharmacology and Personalized Therapeutics
2014/05/02 by Marwa T. ElRakaiby, Bas E. Dutilh, Mariam R. Rizkallah +3 · 1 citation
Biochemistry, Genetics and Molecular Biology · Medicine · #Gut microbiota and health #Microscopic Colitis #Colorectal Cancer Screening and Detection
- Scalable and systematic hierarchical virus taxonomy with vConTACT3
2025/11/06 by Benjamin Bolduc, Olivier Zablocki, Dann Turner +5 · 1 voice · 1 citation
Environmental Science · Biochemistry, Genetics and Molecular Biology · #Bacteriophages and microbial interactions #Genomics and Phylogenetic Studies #Environmental DNA in Biodiversity Studies