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Spectral analysis and clustering of large stochastic networks. Application to the Lennard-Jones-75 cluster

2015/11/17 by Maria Cameron, Cameron, Maria, Tingyue Gan +1 · 1 citation
Materials Science · Physics and Astronomy · #60J22 #60J28 #Advanced Thermodynamics and Statistical Mechanics #FOS: Mathematics #FOS: Physical sciences #Material Dynamics and Properties #Probability (math.PR) #Statistical Mechanics (cond-mat.stat-mech) #Theoretical and Computational Physics

paper · pdf · doi:10.48550/arxiv.1511.05269

openalex publication_date 2015/11/17 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/28

Abstract

We consider stochastic networks with pairwise transition rates of the exponential form where the temperature T is a small parameter. Such networks arise in physics and chemistry and serve as mathematically tractable models of complex systems. Typically, such networks contain large numbers of states and widely varying pairwise transition rates. We present a methodology for spectral analysis and clustering of such networks that takes advance of the small parameter T and consists of two steps: (1) computing zero-temperature asymptotics for eigenvalues and the collection of quasi-invariant sets, and (2) finite temperature continuation. Step (1) is re- ducible to a sequence of optimization problems on graphs. A novel single-sweep algorithm for solving them is introduced. Its mathematical justification is provided. This algorithm is valid for both time-reversible and time-irreversible networks. For time-reversible networks, a finite temperature continuation technique combining lumping and truncation with Rayleigh quotient iteration is developed. The proposed methodology is applied to the network representing the energy landscape of the Lennard-Jones-75 cluster containing 169,523 states and 226,377 edges. The transition process between its two major funnels, is analyzed. The corresponding eigenvalue is shown to have a kink at the solid-solid phase transition temperature.

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