Counting and enumerating tree-child networks and their subclasses

2020/06/09 by Gabriel Cardona, Louxin Zhang · 13 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Plant and animal studies #Genomics and Phylogenetic Studies #Genetic diversity and population structure

paper · doi:10.1016/j.jcss.2020.06.001

Cited by

• Evolving View on Phylogenetic Networks
• A branching process approach to level-k phylogenetic networks
• A dichotomy law for certain classes of phylogenetic networks
• Combinatorial characterization of a certain class of words and a conjectured connection with general subclasses of phylogenetic tree-child networks. [europepmc]
• Embedding gene trees into phylogenetic networks by conflict resolution algorithms. [europepmc]
• All galls are divided into three or more parts: recursive enumeration of labeled histories for galled trees. [europepmc]
• A fast and scalable method for inferring phylogenetic networks from trees by aligning lineage taxon strings. [europepmc]
• Generation of Orchard and Tree-Child Networks. [europepmc]
• Enumeration of Rooted Binary Unlabeled Galled Trees. [europepmc]
• Sackin indices for labeled and unlabeled classes of galled trees. [europepmc]
• Spaces of ranked tree-child networks. [europepmc]
• A Dichotomy Law for Certain Classes of Phylogenetic Networks. [europepmc]
• Counting Spinal Phylogenetic Networks. [europepmc]