Sequence of the Tomato Chloroplast DNA and Evolutionary Comparison of Solanaceous Plastid Genomes

2006/07/07 by Sabine Kahlau, Sue Aspinall, John C. Gray +1 · 26 citations
Biochemistry, Genetics and Molecular Biology · #Photosynthetic Processes and Mechanisms #Genomics and Phylogenetic Studies #CRISPR and Genetic Engineering

paper · doi:10.1007/s00239-005-0254-5

Cited by

• The plastid genome of the non-photosynthetic plant Rhopalocnemis phalloides is one of the most polymorphic genomes known
• Comparative chloroplast genomics: analyses including new sequences from the angiosperms Nuphar advena and Ranunculus macranthus. [europepmc]
• The complete nucleotide sequence of the cassava (Manihot esculenta) chloroplast genome and the evolution of atpF in Malpighiales: RNA editing and multiple losses of a group II intron. [europepmc]
• Dynamics and evolution of the inverted repeat-large single copy junctions in the chloroplast genomes of monocots. [europepmc]
• Insensitivity of chloroplast gene expression to DNA methylation. [europepmc]
• Loss of matK RNA editing in seed plant chloroplasts. [europepmc]
• Identification of new polymorphic regions and differentiation of cultivated olives (Olea europaea L.) through plastome sequence comparison. [europepmc]
• Plant plastid engineering. [europepmc]
• Evolutionary constraints on the plastid tRNA set decoding methionine and isoleucine. [europepmc]
• Plastid Proteomic Analysis in Tomato Fruit Development. [europepmc]
• Abundant RNA editing sites of chloroplast protein-coding genes in Ginkgo biloba and an evolutionary pattern analysis. [europepmc]
• Identification and Analysis of RNA Editing Sites in the Chloroplast Transcripts of Aegilops tauschii L. [europepmc]
• The Complete Chloroplast Genome Sequences of Fritillaria ussuriensis Maxim. and Fritillaria cirrhosa D. Don, and Comparative Analysis with Other Fritillaria Species. [europepmc]
• The Complete Chloroplast Genome Sequences of the Medicinal Plant Forsythia suspensa (Oleaceae). [europepmc]
• Optimized Method of Extracting Rice Chloroplast DNA for High-Quality Plastome Resequencing and de Novo Assembly. [europepmc]
• The chloroplast genome sequence of bittersweet (Solanum dulcamara): Plastid genome structure evolution in Solanaceae. [europepmc]
• A missense mutation of plastid RPS4 is associated with chlorophyll deficiency in Chinese cabbage (Brassica campestris ssp. pekinensis). [europepmc]
• Authentication of Herbal Medicines Dipsacus asper and Phlomoides umbrosa Using DNA Barcodes, Chloroplast Genome, and Sequence Characterized Amplified Region (SCAR) Marker. [europepmc]
• The Complete Chloroplast Genomes of Six Ipomoea Species and Indel Marker Development for the Discrimination of Authentic Pharbitidis Semen (Seeds of I. nil or I. purpurea ). [europepmc]
• Sequencing and Structural Analysis of the Complete Chloroplast Genome of the Medicinal Plant Lycium chinense Mill. [europepmc]
• Differentiation of chromoplasts and other plastids in plants. [europepmc]
• The res (restored cell structure by salinity) tomato mutant reveals the role of the DEAD-box RNA helicase SlDEAD39 in plant development and salt response. [europepmc]
• Accumulation of the RNA polymerase subunit RpoB depends on RNA editing by OsPPR16 and affects chloroplast development during early leaf development in rice. [europepmc]
• Comparative and Phylogenetic Analysis of the Complete Chloroplast Genomes of Three Paeonia Section Moutan Species (Paeoniaceae). [europepmc]
• Improved genome assembly and pan-genome provide key insights into eggplant domestication and breeding. [europepmc]
• A photosynthesis operon in the chloroplast genome drives speciation in evening primroses. [europepmc]