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Cell Electropermeabilization Modeling via Multiple Traces Formulation and Time Semi-Implicit Coupling

2024/03/28 by Isabel A. Martínez Ávila, Ávila, Isabel A. Martínez, Carlos Jerez-Hanckes +3
Biochemistry, Genetics and Molecular Biology · Agricultural and Biological Sciences · #Microbial Inactivation Methods #Plant Virus Research Studies #Viral Infectious Diseases and Gene Expression in Insects

paper · pdf · doi:10.48550/arxiv.2403.19371

Abstract

We simulate the electrical response of multiple disjoint biological 3D cells undergoing an electropermeabilization process. Instead of solving the boundary value problem in the unbounded volume, we reduce it to a system of boundary integrals equations--the local Multiple Traces Formulation--coupled with nonlinear dynamics on the cell membranes. Though in time the model is highly non-linear and poorly regular, the smooth geometry allows for boundary unknowns to be spatially approximated by spherical harmonics. This leads to spectral convergence rates in space. In time, we use a multistep semi-implicit scheme. To ensure stability, the time step needs to be bounded by the smallest characteristic time of the system. Numerical results are provided to validate our claims and future enhancements are pointed out.

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