Nearly telomere-to-telomere genome assembly of the L. edodes diploid genome

2025/06/01 by Kazutoshi Yoshitake, Kenta Shirasawa, Kenji K. Kojima +3 · 7 citations

paper · doi:10.1016/j.fgb.2025.104005

published in Fungal Genetics and Biology 179, 104005 (Elsevier BV)

crossref created 2025/05/23 · crossref issued 2025/06/01 · crossref published 2025/06/01 · crossref published-print 2025/06/01 · crossref deposited 2026/05/12 · crossref indexed 2026/08/07

Citations

• Haplotype-resolved de novo assembly with phased assembly graphs
• Long-range enhancer–promoter contacts in gene expression control
• Minimap2: pairwise alignment for nucleotide sequences
• Fast and accurate de novo genome assembly from long uncorrected reads
• A fast, lock-free approach for efficient parallel counting of occurrences of k -mers
• New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
• A genetic linkage map of the human genome
• A Note on Two Problems in Connexion with Graphs