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Diffusion Through a Network of Compartments Separated by Partially-Transmitting Boundaries

2018/10/04 by Gorka Muñoz-Gil, Miguel Ángel García-March, Miguel Angel García-March +3
Biochemistry, Genetics and Molecular Biology · Mathematics · Physics and Astronomy · #Biological system #Biology #Boundary (topology) #Computer science #Constant (computer programming) #Diffusion #Diffusion and Search Dynamics #Fractional Differential Equations Solutions #Geology #Mathematical analysis #Mathematics #Mesoscale meteorology #Meteorology #Microscale chemistry #Optics #Particle (ecology) #Physics #Random walk #Statistical physics #Statistics #Thermodynamics #Transmittance #cond-mat.soft #cond-mat.stat-mech #physics.bio-ph #stochastic dynamics and bifurcation

paper · pdf · doi:10.3389/fphy.2019.00031

5 pages, 2 figures

arxiv created 2018/10/04 · openalex created_date 2018/10/12 · arxiv updated 2019/03/12 · openalex publication_date 2019/03/18 · openalex updated_date 2026/08/05

Abstract

We study the random walk of a particle in a compartmentalized environment, as realized in biological samples or solid state compounds. Each compartment is characterized by its length L and the boundaries transmittance T. We identify two relevant spatio-temporal scales that provide alternative descriptions of the dynamics: i) the microscale, in which the particle position is monitored at constant time intervals; and ii) the mesoscale, in which it is monitored only when the particle crosses a boundary between compartments. Both descriptions provide --by construction-- the same long time behavior. The analytical description obtained at the proposed mesoscale allows for a complete characterization of the complex movement at the microscale, thus representing a fruitful approach for this kind of systems. We show that the presence of disorder in the transmittance is a necessary condition to induce anomalous diffusion, whereas the spatial heterogeneity reduces the degree of subdiffusion and, in some cases, can even compensate for the disorder induced by the stochastic transmittance.

Citations