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Novel casein-derived immunomodulatory peptide PFPEVFG: Activity assessment, molecular docking, activity site, and mechanism of action

2024/07/20 by Siyi Li, Yutong Jiang, Zhiqi Cao +3 · 3 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Chemistry · Medicine · Nursing · #Biochemistry #Biology #Casein #Chemistry #Computational biology #Docking (animal) #In vitro #Infant Nutrition and Health #Mechanism (biology) #Mechanism of action #Medicine #Peptide #Pharmacology #Probiotics and Fermented Foods #Protein Hydrolysis and Bioactive Peptides

paper · pdf · doi:10.3168/jds.2024-25173

openalex publication_date 2024/07/20 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/26

Abstract

Nowadays, there is still a gap in the knowledge of the structure-activity relationship of immunomodulatory peptides. In this study, PFPEVFG was selected as a peptide with immunomodulatory activity from casein hydrolysate by virtual screening and its immunomodulatory activity was verified by the phagocytosis, proliferation, and expression of cytokines (IL-6, IL-1β, TNF-α) and chemokines (CXCL1, CXCL2) in RAW 264.7 macrophages. Next, molecular docking and double-stranded small interfering RNA (siRNA) mutually verified that the immunomodulatory activity of PFPEVFG was mediated by TLR2/4. Furthermore, the highest occupied molecular orbital (HOMO) analysis showed that the C 19 = O 20 site with a HOMO contribution of 32.22988% was its active site, and the phenylalanine, where the C 19 = O 20 site was located, was its active amino acid. Finally, the combination of pathway inhibitors and Western blot revealed that PFPEVFG activated macrophages through the nuclear factor-κB (NF-κB) signaling pathway. In summary, this study provided a new perspective on deeply understanding the structure-activity relationship of casein-derived immunomodulatory peptides, as well as a further theoretical and technological basis for the application of immunomodulatory peptides.

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