Identifying localized biases in large datasets: A case study using the avian tree of life

2013/06/20 by Rebecca T. Kimball, Ning Wang, Victoria Heimer‐McGinn +3 · 17 citations
Biochemistry, Genetics and Molecular Biology · Earth and Planetary Sciences · #Evolution and Paleontology Studies #Genetic diversity and population structure #Genomics and Phylogenetic Studies

paper · doi:10.1016/j.ympev.2013.05.029

openalex publication_date 2013/06/20 · crossref created 2013/06/20 · crossref issued 2013/12/01 · crossref published 2013/12/01 · crossref published-print 2013/12/01 · crossref deposited 2024/05/12 · openalex created_date 2025/10/10 · crossref indexed 2026/06/07 · openalex updated_date 2026/07/22

Citations

• Cases in which Parsimony or Compatibility Methods will be Positively Misleading
• An Empirical Test of Bootstrapping as a Method for Assessing Confidence in Phylogenetic Analysis
• Comparison of phylogenetic trees

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• What Have We Learned from the First 500 Avian Genomes?
• Why Do Phylogenomic Data Sets Yield Conflicting Trees? Data Type Influences the Avian Tree of Life more than Taxon Sampling
• Phylogenetic Signal of Indels and the Neoavian Radiation
• Comprehensive taxon sampling and vetted fossils help clarify the time tree of shorebirds (Aves, Charadriiformes)
• Determining the Position of Storks on the Phylogenetic Tree of Waterbirds by Retroposon Insertion Analysis
• Does more sequence data improve estimates of galliform phylogeny? Analyses of a rapid radiation using a complete data matrix
• Building the avian tree of life using a large-scale, sparse supermatrix
• The Evolution and Fossil Record of Palaeognathous Birds (Neornithes: Palaeognathae)
• Whole genome phylogeny of Gallus: introgression and data-type effects
• Resolving the Avian Tree of Life from Top to Bottom: The Promise and Potential Boundaries of the Phylogenomic Era
• Eucavitaves [wikipedia]
• Picocoraciae [wikipedia]
• Picodynastornithes [wikipedia]