Advances in the field of RNA 3D structure prediction and modeling, with purely theoretical approaches, and with the use of experimental data

2024/09/24 by Sunandan Mukherjee, S Naeim Moafinejad, S. Naeim Moafinejad +3 · 1 voice
Biochemistry, Genetics and Molecular Biology · #RNA Research and Splicing #RNA and protein synthesis mechanisms #RNA modifications and cancer

paper · doi:10.1016/j.str.2024.08.015

openalex publication_date 2024/09/24 · crossref created 2024/09/24 · crossref issued 2024/11/01 · crossref published 2024/11/01 · crossref published-print 2024/11/01 · openalex created_date 2025/10/10 · crossref deposited 2025/11/08 · crossref indexed 2026/07/23 · openalex updated_date 2026/08/04

Citations

• The role of nucleobase interactions in RNA structure and dynamics
• Therapeutic Antisense Oligonucleotides Are Coming of Age
• Improved protein structure prediction using potentials from deep learning
• FARFAR2: Improved De Novo Rosetta Prediction of Complex Global RNA Folds
• Highly accurate protein structure prediction with AlphaFold
• Accurate prediction of protein structures and interactions using a three-track neural network
• RNA tertiary structure prediction using RNAComposer in CASP15
• Discovery of a trefoil knot in the RydC RNA: Challenging previous notions of RNA topology
• RiNALMo: General-Purpose RNA Language Models Can Generalize Well on Structure Prediction Tasks
• Accurate structure prediction of biomolecular interactions with AlphaFold 3

Discussions

• This review highlights recent advances in #RNA3D structure prediction, combining #AI-driven computational methods and new experimental data, with implications for molecular biology and RNA-targeted #D [bsky, 0 points, 0 comments]