Phylogenomics of neglected flagellated protists supports a revised eukaryotic tree of life

2024/12/05 by Guifré Torruella, Luis Javier Galindo, David Moreira +2 · 1 voice · 1 citation
Biochemistry, Genetics and Molecular Biology · Environmental Science · #Genomics and Phylogenetic Studies #Microbial Community Ecology and Physiology #Protist diversity and phylogeny

paper · doi:10.1016/j.cub.2024.10.075

openalex publication_date 2024/12/05 · crossref created 2024/12/05 · crossref issued 2025/01/01 · crossref published 2025/01/01 · crossref published-print 2025/01/01 · openalex created_date 2025/10/10 · crossref deposited 2026/01/06 · crossref indexed 2026/06/18 · openalex updated_date 2026/08/01

Citations

• IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
• PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
• MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
• Between a Pod and a Hard Test: The Deep Evolution of Amoebae
• Modeling Site Heterogeneity with Posterior Mean Site Frequency Profiles Accelerates Accurate Phylogenomic Estimation
• GTDB: an ongoing census of bacterial and archaeal diversity through a phylogenetically consistent, rank normalized and complete genome-based taxonomy
• eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale
• Divergent genomic trajectories predate the origin of animals and fungi
• Lost world of complex life and the late rise of the eukaryotic crown
• The Origin of Metazoan Multicellularity: A Potential Microbial Black Swan Event
• Meteora sporadica, a protist with incredible cell architecture, is related to Hemimastigophora

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Discussions

• 論文がpublishされていた。 Torruella et al. (2024) Phylogenomics of neglected flagellated protists supports a revised eukaryotic tree of life. https://doi.org/10.1016/j.cub.2024.10.075 [bsky, 0 points, 0 comments]