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Multimodal learning reveals plants’ hidden sensory integration logic

2026/02/19 by Kelly L. Vomo-Donfack, Rafael Jorge León Morcillo, Grégory GINOT +2 · 1 voice
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Plant and Biological Electrophysiology Studies #Plant biochemistry and biosynthesis #Plant-Microbe Interactions and Immunity

paper · doi:10.1186/s12864-026-12624-y

openalex created_date 2026/02/19 · openalex publication_date 2026/02/19 · openalex updated_date 2026/07/23

Abstract

Plants integrate complex environmental signals through interconnected molecular networks, yet the fundamental rules governing this sensory integration remain unknown. Studying tomato roots interacting with fungal symbionts, we discovered how microbial effectors systematically reprogram plant sensory systems by coordinating transcriptional, metabolic, and phenotypic responses. Our multimodal analysis not only confirmed prior experimental findings through purely computational means, but also revealed novel integration hubs where sensory pathways converge. This dual validation approach revealed two key mechanisms: first, the rewiring of iron homeostasis through citrate-mediated redox control, and second, the targeted suppression of jasmonate defences. Furthermore, we demonstrate how nuclear splicing programs are isolated from metabolic noise. These findings establish a new paradigm for understanding plant-microbe communication by showing how symbionts exploit latent hubs where sensory pathways converge. The discovered integration logic provides both fundamental insights into plant perception and concrete targets for engineering stress-resilient crops.

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