Genome-wide profiling of heritable and de novo STR variations

2017/04/24 by Thomas Willems, Dina Zielinski, Jie Yuan +3 · 1 voice · 5 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Genetic Mapping and Diversity in Plants and Animals #Genomics and Phylogenetic Studies #Plant Disease Resistance and Genetics

paper · doi:10.1038/nmeth.4267

crossref issued 2017/04/24 · crossref published 2017/04/24 · crossref published-online 2017/04/24 · openalex publication_date 2017/04/24 · crossref created 2017/04/24 · crossref published-print 2017/06/01 · crossref deposited 2024/06/23 · openalex created_date 2025/10/10 · crossref indexed 2026/07/17 · openalex updated_date 2026/07/29

Citations

• A framework for variation discovery and genotyping using next-generation DNA sequencing data

Cited by

• Systematic evaluation of the impact of promoter proximal short tandem repeats on expression
• Single Nucleotide Polymorphisms, Structural Variants, and Short Tandem Repeats Capture Distinct Signals of Adaptive Divergence in the Atlantic Puffin
• TRsv: simultaneous detection of tandem repeat variations, structural variations, and short indels using long read sequencing data
• Multi-omic quantitative trait loci link tandem repeat size variation to gene regulation in human brain
• Genomics of Sable ( Martes zibellina) × Pine Marten ( Martes martes ) Hybridization

Discussions

• And here's HipSTR's paper doi.org/10.1038/nmet... [bsky, 1 points, 0 comments]