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MyVivarium: A cloud-based lab animal colony management application with realtime ambient sensing

2025/01/01 by Robinson Vidva, Mir Abbas Raza, Jaswant Prabhakaran +10 · 1 voice
Biochemistry, Genetics and Molecular Biology · #Insect and Arachnid Ecology and Behavior #Viral Infectious Diseases and Gene Expression in Insects

paper · doi:10.1016/j.csbj.2025.01.025

openalex publication_date 2025/01/01 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/23

Abstract

, an open-source database management web application to address these gaps. MyVivarium can be easily deployed to the cloud and sustained for a cost comparable to starting and maintaining a lab website. Using MyVivarium, lab members can collaboratively track individual animals within a database. Physical identities of cages map onto the database using QR codes, enabling quick and easy record-keeping on mobile devices. Lab administrators can assign tasks to users with reminders for experiments or cage maintenance. Finally, we designed a low-cost system to sense ambient humidity, temperature, vivarium worker activity, and room illuminance. These data are then sent to MyVivarium in realtime providing information relevant to colony well-being. Taken together, MyVivarium is a novel, open-source, cloud-based application template that provides a low-cost, simple, and efficient way to digitally manage research-animal colonies.

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