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Saccharomyces genome database update: server architecture, pan-genome nomenclature, and external resources

2023/01/04 by Edith D. Wong, Stuart R. Miyasato, Suzi Aleksander +6 · 1 voice · 3 citations
Biochemistry, Genetics and Molecular Biology · #Bioinformatics and Genomic Networks #Genomics and Phylogenetic Studies #Microbial Metabolic Engineering and Bioproduction

paper · pdf · doi:10.1093/genetics/iyac191

openalex publication_date 2023/01/04 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/15

Abstract

As one of the first model organism knowledgebases, Saccharomyces Genome Database (SGD) has been supporting the scientific research community since 1993. As technologies and research evolve, so does SGD: from updates in software architecture, to curation of novel data types, to incorporation of data from, and collaboration with, other knowledgebases. We are continuing to make steps toward providing the community with an S. cerevisiae pan-genome. Here, we describe software upgrades, a new nomenclature system for genes not found in the reference strain, and additions to gene pages. With these improvements, we aim to remain a leading resource for students, researchers, and the broader scientific community.

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