vix.ing · top · new · best · stats

Molecular dynamics simulation of the nanosecond pulsed electric field effect on kinesin nanomotor

2019/12/23 by Jiří Průša, Michal Cifra · 1 voice · 2 citations
Biochemistry, Genetics and Molecular Biology · Neuroscience · Physics and Astronomy · #Micro and Nano Robotics #Microtubule and mitosis dynamics #Photoreceptor and optogenetics research

paper · pdf · doi:10.1038/s41598-019-56052-3

openalex publication_date 2019/12/23 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/23

Abstract

Kinesin is a biological molecular nanomotor which converts chemical energy into mechanical work. To fulfill various nanotechnological tasks in engineered environments, the function of biological molecular motors can be altered by artificial chemical modifications. The drawback of this approach is the necessity of designing and creating a new motor construct for every new task. We propose that intense nanosecond-scale pulsed electric field could modify the function of nanomotors. To explore this hypothesis, we performed molecular dynamics simulation of a kinesin motor domain docked on a subunit of its microtubule track - a single tubulin heterodimer. In the simulation, we exposed the kinesin motor domain to intense (100 MV/m) electric field up to 30 ns. We found that both the magnitude and angle of the kinesin dipole moment are affected. Furthermore, we found that the electric field affects contact surface area between kinesin and tubulin, the structure and dynamics of the functionally important kinesin segments, including microtubule binding motifs as well as nucleotide hydrolysis site which power the nanomotor. These findings indicate that external intense nanosecond-scale electric field could alter kinesin behavior. Our results contribute to developing novel electromagnetic methods for modulating the function of biomolecular matter at the nanoscale.

Citations

Cited by

Discussions

Related