A Generator of Protein Folding Kinetics States for the Diffusion-Collision Model

2000/11/19 by Zlatko K. Vasilkoski, David L. Weaver
Physics and Astronomy · #physics.comp-ph

paper · pdf

published as Journal of Computational Chemistry, Vol. 21, No. 11, 923-932 (2000) · 14 pages, 4 figures, latex file

arxiv created 2000/11/19 · arxiv updated 2009/12/01

Abstract

Two separate algorithms for calculating the intermediate states, using cellular automata and the initial conditions in the rate matrix for the diffusion-collision model are introduced. They enable easy and fast calculations of the folding probabilities of the intermediate states, even for a very large number of microdomains.

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