Cross Sequencing Integration of Compositional Microbiome Data in Cancer

2025/01/01 by Diego Fernández-Edreira, José Liñares-Blanco, Jose Liñares-Blanco +1 · 1 voice
Biochemistry, Genetics and Molecular Biology · Dentistry · #Dental Health and Care Utilization #Gut microbiota and health #Oral microbiology and periodontitis research

paper · doi:10.1007/978-3-031-89704-7_6

openalex publication_date 2025/01/01 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/29

Citations

• The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
• Greengenes2 unifies microbial data in a single reference tree
• Tackling the widespread and critical impact of batch effects in high-throughput data

Discussions

• We´re happy to share a new conference paper from the #MALL lab! We explore integrating microbiome data from 16S rRNA & Whole Genome Shotgun across platforms. Can we combine them meaningfully despite [bsky, 6 points, 2 comments]