Revisiting a GWAS peak in Arabidopsis thaliana reveals possible confounding by genetic heterogeneity

2021/07/05 by Eriko Sasaki, Thomas Köcher, Danièle L. Filiault +2 · 23 citations
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · #Allele #Arabidopsis #Arabidopsis thaliana #Biology #Candidate gene #Confounding #Evolutionary biology #Flowering Locus C #Gene #Genetic Mapping and Diversity in Plants and Animals #Genetic and phenotypic traits in livestock #Genetic architecture #Genetic association #Genetic variation #Genetics #Genome-wide association study #Genotype #Locus (genetics) #Mutant #Plant Molecular Biology Research #Quantitative trait locus #Single-nucleotide polymorphism #Spurious relationship

paper · pdf · doi:10.1038/s41437-021-00456-3

published in Heredity 127(3), 245-252 (Springer Nature)

openalex publication_date 2021/07/05 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/23

Citations

• The Post-GWAS Era: From Association to Function

Cited by

• Planting Genomes in the Wild: Arabidopsis from Genetics History to the Ecology and Evolutionary Genomics Era
• Beyond the Standard GWAS—A Guide for Plant Biologists
• Functional Annotation – How to Tackle the Bottleneck in Plant Genomics
• Crafting for a better MAGIC: systematic design and test for Multiparental Advanced Generation Inter-Cross population. [europepmc]
• Conditional GWAS of non-CG transposon methylation in Arabidopsis thaliana reveals major polymorphisms in five genes. [europepmc]
• Mega-scale Bayesian regression methods for genome-wide prediction and association studies with thousands of traits. [europepmc]
• Identification of Genomic Regions for Traits Associated with Flowering in Cassava ( Manihot esculenta Crantz). [europepmc]
• Dual-trait genomic analysis in highly stratified Arabidopsis thaliana populations using genome-wide association summary statistics. [europepmc]
• Major alleles of CDCA7 shape CG methylation in Arabidopsis thaliana. [europepmc]
• Epigenetic inheritance mediates phenotypic diversity in natural populations [europepmc]