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The Multiscale Bowler-Hat Transform for Vessel Enhancement in 3D Biomedical Images

2018/02/14 by Cigdem Sazak, Sazak, Cigdem, Carl J. Nelson +3
Computer Science · #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #cs.CV

paper · pdf · doi:10.48550/arxiv.1802.05097

arxiv created 2018/02/14 · arxiv updated 2018/02/15

Abstract

Enhancement and detection of 3D vessel-like structures has long been an open problem as most existing image processing methods fail in many aspects, including a lack of uniform enhancement between vessels of different radii and a lack of enhancement at the junctions. Here, we propose a method based on mathematical morphology to enhance 3D vessel-like structures in biomedical images. The proposed method, 3D bowler-hat transform, combines sphere and line structuring elements to enhance vessel-like structures. The proposed method is validated on synthetic and real data and compared with state-of-the-art methods. Our results show that the proposed method achieves a high-quality vessel-like structures enhancement in both synthetic and real biomedical images, and is able to cope with variations in vessels thickness throughout vascular networks while remaining robust at junctions.

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