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Multi-Sensor and Multi-temporal High-Throughput Phenotyping for Monitoring and Early Detection of Water-Limiting Stress in Soybean

2024/02/28 by Sarah E. Jones, Timilehin T. Ayanlade, Jones, Sarah E. +13
Agricultural and Biological Sciences · Chemistry · #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Machine Learning (cs.LG) #Smart Agriculture and AI #Soybean genetics and cultivation #Spectroscopy and Chemometric Analyses

paper · pdf · doi:10.48550/arxiv.2402.18751

openalex publication_date 2024/02/28 · openalex created_date 2025/10/10 · openalex updated_date 2026/08/01

Abstract

Soybean production is susceptible to biotic and abiotic stresses, exacerbated by extreme weather events. Water limiting stress, i.e. drought, emerges as a significant risk for soybean production, underscoring the need for advancements in stress monitoring for crop breeding and production. This project combines multi-modal information to identify the most effective and efficient automated methods to investigate drought response. We investigated a set of diverse soybean accessions using multiple sensors in a time series high-throughput phenotyping manner to: (1) develop a pipeline for rapid classification of soybean drought stress symptoms, and (2) investigate methods for early detection of drought stress. We utilized high-throughput time-series phenotyping using UAVs and sensors in conjunction with machine learning (ML) analytics, which offered a swift and efficient means of phenotyping. The red-edge and green bands were most effective to classify canopy wilting stress. The Red-Edge Chlorophyll Vegetation Index (RECI) successfully differentiated susceptible and tolerant soybean accessions prior to visual symptom development. We report pre-visual detection of soybean wilting using a combination of different vegetation indices. These results can contribute to early stress detection methodologies and rapid classification of drought responses in screening nurseries for breeding and production applications.

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